Transcript Information: R_Transcript_260269.p1


Annotated TAIR IDAT5G55840.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:22598038-22601688 | Forward length=1136
E-Value4E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.66983342953096
Replicate 20.096313304661918
Replicate 30.210153555928
Condition 2: 8 Hour
Replicate 10.33696144422815
Replicate 20.20514570496501
Replicate 30.66611415120686
Condition 3: 24 Hour
Replicate 10.21062208465784
Replicate 20.2023418246842
Replicate 30.80321852062009


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_260269.p1 GENE.R_Transcript_260269~~R_Transcript_260269.p1 ORF type:3prime_partial len:218 (+),score=18.01,PPR_2|PF13041.2|3.4e-06,PPR_2|PF13041.2|2,PPR_2|PF13041.2|3.9,PPR_2|PF13041.2|0.00052,PPR_2|PF13041.2|0.0003,PPR|PF01535.16|5.7,PPR|PF01535.16|0.015,PPR|PF01535.16|0.12,PPR|PF01535.16|5.5,PPR|PF01535.16|0.00018,PPR_1|PF12854.3|19,PPR_1|PF12854.3|0.51,PPR_1|PF12854.3|0.056,PPR_1|PF12854.3|3.7e+02,PPR_1|PF12854.3|3.9e-05,PPR_3|PF13812.2|0.052,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|2.7e+03,PPR_3|PF13812.2|20,PPR_3|PF13812.2|0.24 R_Transcript_260269:60-710(+)
ATGGGATATTCAGGAATTAGGCCCTCTGTTAATGATTACAATGCATTACTTTATTGCTATTTGAAGTCTGGTAATGTGGTGTTTCATGAAGTAGTTAGTGTCCATTTGCATATGAAAAAGTTTGGACCGTGCCCGAATGCTTTAACTTATAATAGCCTCTTTAATGGTATGTTGTTGCTCAATTGTTTGGGGGATGCATTGTGCATTGTTGAGGAGATGCATAGAAGTGGGTATACGCCCTCGTTTTGTTCTTTGTCGAAGTTGTTGAAGAGGTTGTTGAGTGTGGAGAATTTAGCTGATTCGAGATATGTAGTAGAGTTGATGTTTGTATTGAATTATTTGCCAACCGAATCTTTACTACATTTGTTGATTATGAAGCTTTGTAAAGTGGGTATGGTACATGAGGCATATAGTGTTTTGAGAGCTTTAATTAGCATAGGAAAGCTTTGCTCGACACTTGTATATAATCCGATTTTGTGGGCTTTGTGTAAATGTAACAAGAGTGTTGTTGCATTGTCGTTTTTATATTCTTTGAACAAGAGGGGTTATGTACATAATGTGTGCTCATATACCGGTTTAGTGTATGGGTTTAGTAAGGAGAAGATGTGGAGTGAAGCTTTTCAGGTTTTTAGTCAGATGGAAAGTGTTAGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_260269.p1 GENE.R_Transcript_260269~~R_Transcript_260269.p1 ORF type:3prime_partial len:218 (+),score=18.01,PPR_2|PF13041.2|3.4e-06,PPR_2|PF13041.2|2,PPR_2|PF13041.2|3.9,PPR_2|PF13041.2|0.00052,PPR_2|PF13041.2|0.0003,PPR|PF01535.16|5.7,PPR|PF01535.16|0.015,PPR|PF01535.16|0.12,PPR|PF01535.16|5.5,PPR|PF01535.16|0.00018,PPR_1|PF12854.3|19,PPR_1|PF12854.3|0.51,PPR_1|PF12854.3|0.056,PPR_1|PF12854.3|3.7e+02,PPR_1|PF12854.3|3.9e-05,PPR_3|PF13812.2|0.052,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|2.7e+03,PPR_3|PF13812.2|20,PPR_3|PF13812.2|0.24 R_Transcript_260269:60-710(+)
MGYSGIRPSVNDYNALLYCYLKSGNVVFHEVVSVHLHMKKFGPCPNALTYNSLFNGMLLLNCLGDALCIVEEMHRSGYTPSFCSLSKLLKRLLSVENLADSRYVVELMFVLNYLPTESLLHLLIMKLCKVGMVHEAYSVLRALISIGKLCSTLVYNPILWALCKCNKSVVALSFLYSLNKRGYVHNVCSYTGLVYGFSKEKMWSEAFQVFSQMESVR

Click here to download the sequence:
Link to NCBI Protein BLAST