Transcript Information: R_Transcript_260314.p1


Annotated TAIR IDAT5G24620.1
Annotated Gene NamePathogenesis-related thaumatin superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:8430918-8432289 | Forward length=420
E-Value2.6E-133
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9003082637789
Replicate 21.4381027682396
Replicate 32.1965364818228
Condition 2: 8 Hour
Replicate 11.1404375454881
Replicate 22.0829314591789
Replicate 32.1384089224018
Condition 3: 24 Hour
Replicate 13.3964975076603
Replicate 21.812761004705
Replicate 32.4586188826378


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_260314.p1 GENE.R_Transcript_260314~~R_Transcript_260314.p1 ORF type:complete len:365 (+),score=35.04,Thaumatin|PF00314.13|5.7e-80 R_Transcript_260314:332-1426(+)
ATGCCAAACGTATCTTCCTTTATGCTTATTGGCTTCGCTACCATCATCATATCTTTCCTGTTTCCCTATACAGTATCTTGCACATTTATCATAACCAACAACTGTCCATTTACCATATGGCCCGGGACATTATCAGGGTCTGGTACACCCCCACTTTCCCCAACCGGGTTCCAGTTAGAGTCAGGGAAGAGTGTGAAAATTGATGCGGTTCCTGGATGGTCAGGAAGGATATGGGCACGGACAGGGTGCAAGTTTGATGAGAGCGGCATTGGCAAGTGCCAAACAGGGGACTGTGGTGGGAGGTTGCAATGTGATGGGGCGGGAGCCACATCACCTGCATCCCTATTTGAAATAACGCTCGGCCAAGGCAATGACAAGGATTTCTATGATGTTAGCATTGTGGATGGATATAATCTGCCCATTGTTGCTTGGCCTGTCGGGGCTACTGCTGGCGCTGGTGGTGGCGGTTGCAATGCAACCGGCTGTGTCTCTGACATCAATATGGGGTGCCCCAAAGAGTTGCAGGTGGTGAGCGGAGATGGAGGAGGAGGTGGCGGAGTCATCGCATGTAAAAGCGCCTGCGAGGCATTTGGACTGGACCAATACTGTTGTAGCAAACAATTTGCCAACCCAACAACCTGCCGACCATCTTATTATTCGTATATCTTCAAGAGAGCCTGTCCGAGGGCATATAGCTATGCCTTTGATGATGGCACGAGCACATTCACTTGCAAGGCCTACAATTATGCCATCCTTTTCTGCCCTTCTTCAGCTGGCGGGACTAGGAAACCTAGCGGACTGACATACAGTCCACCACCAAGTGATATGTATAATTCATCACCAAGTGCAGGTTACAATTCACCCCCAAGTGACGGATACAATTCACCACCAAGTGGCAGTTACAATCCCCCACCAAGTTTTACTCATCCACCAGGAGGGGGATACAGTTCGCCTCCAAACTTCATCTACAATTCACCACCATTCCAGAAACATAGTCATGGGGCAACTGAGGGGGAGACATCGTCCTCCTACACCATCTTACCCCATCATGTATACATTCTTCTGATCTTTTTCAGTTTGCTGATGCTGAGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_260314.p1 GENE.R_Transcript_260314~~R_Transcript_260314.p1 ORF type:complete len:365 (+),score=35.04,Thaumatin|PF00314.13|5.7e-80 R_Transcript_260314:332-1426(+)
MPNVSSFMLIGFATIIISFLFPYTVSCTFIITNNCPFTIWPGTLSGSGTPPLSPTGFQLESGKSVKIDAVPGWSGRIWARTGCKFDESGIGKCQTGDCGGRLQCDGAGATSPASLFEITLGQGNDKDFYDVSIVDGYNLPIVAWPVGATAGAGGGGCNATGCVSDINMGCPKELQVVSGDGGGGGGVIACKSACEAFGLDQYCCSKQFANPTTCRPSYYSYIFKRACPRAYSYAFDDGTSTFTCKAYNYAILFCPSSAGGTRKPSGLTYSPPPSDMYNSSPSAGYNSPPSDGYNSPPSGSYNPPPSFTHPPGGGYSSPPNFIYNSPPFQKHSHGATEGETSSSYTILPHHVYILLIFFSLLMLS*

Click here to download the sequence:
Link to NCBI Protein BLAST