Transcript Information: R_Transcript_26032.p1


Annotated TAIR IDAT1G55020.1
Annotated Gene Namelipoxygenase 1
Annotated Gene Symbol(s)LOX1, ATLOX1
Annotation TypeOrtholog
Chromosome Positionchr1:20525798-20530143 | Forward length=859
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1175284014133
Replicate 24.7119604422622
Replicate 34.2084471397582
Condition 2: 8 Hour
Replicate 116.342891255487
Replicate 218.850743412627
Replicate 319.840132538563
Condition 3: 24 Hour
Replicate 15.525890809459
Replicate 24.7957365262069
Replicate 38.7041802359522


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_26032.p1 GENE.R_Transcript_26032~~R_Transcript_26032.p1 ORF type:complete len:860 (+),score=165.08,Lipoxygenase|PF00305.15|0,PLAT|PF01477.19|4.4e-18 R_Transcript_26032:105-2684(+)
ATGGAGAGCATTCATAAGCTGGTGGACAGCATTACAGATGGAGCTAAGGAGATAAAAGGAACAGCTGTGTTGATGAAGAAGAACGTACTGGATTTCAATGACTCTGCTGCATCAATCCTTGACGGAGTTGCTGAGCTGCTTGGAAAAAGGGTCTCTTTTCAGCTTGTTAGTGCTGTCAATGCTGATCCTGGCAATGACTCCAAAGGAAAACTGGGAAAACCTTCATACTTGAAAGAGTGGCTCACAACATTCTCTGGTTTAACACCTGGAGACACGGCATTTAAGGTTACATTTGATTGGAACGAGGATATCGGCGCCCCTGGTGCATTTATAGTAAGAAATGAACATCATAATCAGTTTTACCTCAAGACTGTCACCTTGGAAGATGTGCCCGGACAGGGTACCGTCAACTTTGTCTGCAACTCGTGGGTCTATCCAGCTAAACTATACAAGAAAGATCGTATATTCTTCAGCAATAAGACATATCTACCTCACCAAACACCTCCGCCACTGAGCATGTATCGCCAAGAAGAGCTTGAAATTCTAAGAGGAAACGGAGAAGGAAAGCTTGAGGAATGGGATCGCGTATATGACTATGCATTCTACAATGATCTAGGAGATCCAGATAAAGGTCCTAAGTACGTCCGCCCAGTGCTTGGAGGATCTGCTGAATATCCATATCCTCGCAGAGGAAGGACAGGCCGTGCACCAACAAAAACAGATCCTAACACTGAGAGTAGGCTACCACTTATAAAGGGCTTAGACGTGTACGTTCCAAGAGATGAGAGATTTGGGCACTTGAAGTTGTCAGATTTCCTCGCCTATGCGCTCAAGTCCTTGTCTCAGGACTTGGTTGCTGGGCTTGAGTCTGTATTTGACAAGAACCCGAATGAGTTCAACAGTTTTCAAGATGAACTGGATCTGTATGAAGGAGGAATCAAGCTGCCAGACGGTCCTCTGATCGAAAAGATAAAGGACAATATTCCATTTGAATTCCTAAAAGCATTGCTTCAAACTGATGGTGCACCCCTTCTGAAGTTCCCAATGCCACAAATAATCAAAGAGGATAAGTCAGCATGGAGTACTGATGAAGAATTTGCAAGAGAAATGCTAGCTGGGGTGAATCCTCTTGTCATTCGCCGCCTTGAGGAATTTCCTCCAATCAGCAAACTAGATCCTAAAACATATGGAAACCAAAACAGCTCAATCACCAAACAACACGTTGAGCAAAACCTTGATGGAATGGGCATAGATGAGGCAATAAAGAACAACAAGGTTTTCATATTAGATCATCACGACACGTTGATGCCATATCTAAGGAAAATAAACTCAACTTCTTCAAAAGTATATGCAACCAGGACAGTCCTCTTTCTAAAAGATGATGGAACCTTGAAGCCATTGGCAATCGAGTTGAGCCTGCCACATCCAGATGGAGATCAGTTTGGTGCCATTAGCAAGGTTTTCACACCAGCTCGTGATGGGATTGAGGGCTCGATTTGGCAACTAGCCAAAGCTTATGTTGCAGTTAATGATTCTGGTTACCATCAACTTGTCAGCCACTGGTCACGTACTCATGCTGCGATGGAACCATTTGTTATAGCAACAAATAGGCAGCTGAGTGTGCTTCATCCAATTTGCAAACTCTTGCATCCTCATTTTCGTGATACTATGGATATAAATGCCTTAGCCCGACAGATCCTTCTCAATGCAGAAGGATTGCTTGAGAAGACTGTGTTTCCAGGAAAGTATGCCATGGAATGGTCATCTGCAACATACAAGGACTGGGTTTTTACCGAGCAAGCAGTTCCTAGAGATCTTATTAAGAGGGGAATGGCTGTGAAGGACTTAGAAAGCCCAAGTGGCTACCGACTGCTCATAGAAGACTATCCATATGCAGTTGATGGGCTGGAGATATGGTCAGCAATTGAGGTCTGGGTCAAAGATTATTGCTCATTTTACTACAAGTCTGATGACATGATTGCTAATGACACTGAACTACAATCTTGGTGGAAAGAAATCCGCGAAGAAGGCCATGGGGACAAGAAAGACGAGAAATGGTGGCCAGAAATGAAGACGATTGATGAACTGACAGAAACTTGCACAACCATTATATGGGTAGCTTCAGCACTCCATGCAGCAGTCAACTTTGGGCAGTACCCCTATGCAGGCTACCATCCCAACCGACCAACCATAAGCCGTAGGTTCATGCCAGAGCCGAACACCCCTGAATACGAAGAGCTCAAGACTCAACCAGAAAAAGTCTTCCTAAAGACAATCTCGAGCAAGTTGCAGACCTTGCTTGGAATTTCACTCATAGAGCTTTTGTCTAGGCATCCTTCTGATGAGGTCTATCTTGGACAGAGAGACACACATGACTGGACTTCAGACAATGAACCATTACAAGCATTCGACAGATTCAGTAAGAAGCTGGTTGGAATCGAATATAAGATTATTGAAAGGAACAGCAATGGAAGGTGGAAGAACAGGGTTGGACCAGCAAAGCTGCCATACACACTGCTCTATCCTTCAAGTGAGGCAGGGCTCACTGGCAGGGGAATTCCCAACAGCATATCAATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_26032.p1 GENE.R_Transcript_26032~~R_Transcript_26032.p1 ORF type:complete len:860 (+),score=165.08,Lipoxygenase|PF00305.15|0,PLAT|PF01477.19|4.4e-18 R_Transcript_26032:105-2684(+)
MESIHKLVDSITDGAKEIKGTAVLMKKNVLDFNDSAASILDGVAELLGKRVSFQLVSAVNADPGNDSKGKLGKPSYLKEWLTTFSGLTPGDTAFKVTFDWNEDIGAPGAFIVRNEHHNQFYLKTVTLEDVPGQGTVNFVCNSWVYPAKLYKKDRIFFSNKTYLPHQTPPPLSMYRQEELEILRGNGEGKLEEWDRVYDYAFYNDLGDPDKGPKYVRPVLGGSAEYPYPRRGRTGRAPTKTDPNTESRLPLIKGLDVYVPRDERFGHLKLSDFLAYALKSLSQDLVAGLESVFDKNPNEFNSFQDELDLYEGGIKLPDGPLIEKIKDNIPFEFLKALLQTDGAPLLKFPMPQIIKEDKSAWSTDEEFAREMLAGVNPLVIRRLEEFPPISKLDPKTYGNQNSSITKQHVEQNLDGMGIDEAIKNNKVFILDHHDTLMPYLRKINSTSSKVYATRTVLFLKDDGTLKPLAIELSLPHPDGDQFGAISKVFTPARDGIEGSIWQLAKAYVAVNDSGYHQLVSHWSRTHAAMEPFVIATNRQLSVLHPICKLLHPHFRDTMDINALARQILLNAEGLLEKTVFPGKYAMEWSSATYKDWVFTEQAVPRDLIKRGMAVKDLESPSGYRLLIEDYPYAVDGLEIWSAIEVWVKDYCSFYYKSDDMIANDTELQSWWKEIREEGHGDKKDEKWWPEMKTIDELTETCTTIIWVASALHAAVNFGQYPYAGYHPNRPTISRRFMPEPNTPEYEELKTQPEKVFLKTISSKLQTLLGISLIELLSRHPSDEVYLGQRDTHDWTSDNEPLQAFDRFSKKLVGIEYKIIERNSNGRWKNRVGPAKLPYTLLYPSSEAGLTGRGIPNSISI*

Click here to download the sequence:
Link to NCBI Protein BLAST