Transcript Information: R_Transcript_26036.p1


Annotated TAIR IDAT1G55020.1
Annotated Gene Namelipoxygenase 1
Annotated Gene Symbol(s)LOX1, ATLOX1
Annotation TypeOrtholog
Chromosome Positionchr1:20525798-20530143 | Forward length=859
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.70504999395909
Replicate 20.36045150929267
Replicate 30.36867066946597
Condition 2: 8 Hour
Replicate 11.1822574277103
Replicate 21.0556639495839
Replicate 33.2914401232247
Condition 3: 24 Hour
Replicate 10.86214941305756
Replicate 20.35496661304577
Replicate 31.1507484223798


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_26036.p1 GENE.R_Transcript_26036~~R_Transcript_26036.p1 ORF type:complete len:932 (+),score=179.73,Lipoxygenase|PF00305.15|0,PLAT|PF01477.19|8.6e-15 R_Transcript_26036:191-2986(+)
ATGAGAAATCTTAACATTTCTGCTGAGACAGCCAATGTCAATCATGTAAATTTCCCATATAGTAATCCCTTTTCCACTATAAAACCAGCTTCCTTAGCTCTCATTCAGAGAAACCCCAGCCTTTATTTGTTCTCTGCTCCAAAAACCTCTTCCTTGGCTTTGACCAGAAGCAGAGCAAGAATGTCAGACGAAGTTCTCCAAGCTGTAGAACCAAAAAAGCAGCACAAGGAGAAGATTGATGTCGAATCTGGAGAAAACAGTGAAGATGAGGTGATTATTAATGGAACAGTGATCTTGATGAAGAAGACTGTTCTGGGTTTCCATGCATTCCATGCATCTCTAATGGATCGAGTCGATGAGCTGGCTGGCAGGAAGATCTCCCTTCAGCTTGTTAGTGCTGATCCTGCTAATGGAATGAAAGGGAAGCTCAGCAAACCTGCATATTTGAATGGTTGGAGCAGCACATTCAGTGGTTGGAAGTCAGGGGAATCGGCTTTTAAGATTTCATTTCAGTGGGACAAGGATATGGGGATACCAGGTGGATTGATCATACGCAACGAGCATCACCATGAGTTTTACCTCAAAAATGTCACCTTAACTGGTTTCCCTGACCATGATGAAGTTCACTTTGTTTGTAACTCTTGGGTATACCCAGCCGAGTGCTACAAAAAGGACCGCATATTCTTTAGTAACAAGACATACCTTCCACATGAAACTCCTGAACCTCTAAGCAGCTATCGTCAAGAAGAACTGGAAACACTAAGAGGAAACGGAGATGGAAAGCTTGAGGAATGGGATCGCGTATATGACTATGCATTCTACAATGATCTAGGAGATCCAGATAAAGGTCCTAAGTACGTCCGCCCAGTGCTTGGAGGATCTGCTGAATATCCATATCCTCGCAGAGGAAGGACAGGCCGTGCACCAACAAAAACAGATCCTAACACTGAGAGTAGGCTACCACTTATAAAGGGCTTAGACGTGTACGTTCCAAGAGATGAGAGATTTGGGCACTTGAAGTTGTCAGATTTCCTCGCCTATGCGCTCAAGTCCTTGTCTCAGGACTTGGTTGCTGGGCTTGAGTCTGTATTTGACAAGAACCCGAATGAGTTCAACAGTTTTCAAGATGAACTGGATCTGTATGAAGGAGGAATCAAGCTGCCAGACGGTCCTCTGATCGAAAAGATAAAGGACAATATTCCATTTGAATTCCTAAAAGCATTGCTTCAAACTGATGGTGCACCCCTTCTGAAGTTCCCAATGCCACAAATAATCAAAGAGGATAAGTCAGCATGGAGTACTGATGAAGAATTTGCAAGAGAAATGCTAGCTGGGGTGAATCCTCTAGTCATTCGTAGCCTTGAGGAATTTCCCCCAATCAGCAAACTAGATCCTAAAACATATGGAAACCAAAACAGCTCAATCACCAAACAACACGTTGAGCAAAACCTTGATGGAATGGGCATAGATGAGGCAATAAAGAACAACAAGGTTTTCATATTAGATCATCACGACACGTTGATGCCATATCTAAGGAAAATAAACTCAACTTCTTCAAAAGTATATGCAACCAGGACAGTCCTCTTTCTAAAAGATGATGGAACCTTGAAGCCATTGGCAATCGAGTTGAGCCTGCCACATCCAGATGGAGATCAGTTTGGTGCCATTAGCAAGGTTTTCACACCAGCTCGTGATGGGATTGAGGGCTCGATTTGGCAACTAGCCAAAGCTTATGTTGCAGTTAATGATTCTGGTTACCATCAACTTGTCAGCCACTGGTCACGTACTCATGCTGCGATGGAACCATTTGTTATAGCAACAAATAGGCAGCTGAGTGTGCTTCATCCAATTTGCAAACTCTTGCATCCTCATTTTCGTGATACTATGGATATAAATGCCTTAGCCCGACAGATCCTTCTCAATGCAGAAGGATTGCTTGAGAAGACTGTGTTTCCAGGAAAGTATGCCATGGAATGGTCATCTGCAACATACAAGGACTGGGTTTTTACCGAGCAAGCAGTTCCTAGAGATCTTATTAAGAGGGGAATGGCTGTGAAGGACTTAGAAAGCCCAAGTGGCTACCGACTGCTCATAGAAGACTATCCATATGCAGTTGATGGGCTGGAGATATGGTCAGCAATTGAGGTCTGGGTCAAAGATTATTGCTCATTTTACTACAAGTCTGATGACATGATTGCTAATGACACTGAACTACAATCTTGGTGGAAAGAAATCCGCGAAGAAGGCCATGGGGACAAGAAAGACGAGAAATGGTGGCCAGAAATGAAGACGATTGATGAACTGACAGAAACTTGCACAACCATTATATGGGTAGCTTCAGCACTCCATGCAGCAGTCAACTTTGGGCAGTACCCCTATGCAGGCTACCATCCCAACCGACCAACCATAAGCCGTAGGTTCATGCCAGAGCCGAACACCCCTGAATACGAAGAGCTCAAGACTCAACCAGAAAAAGTCTTCCTAAAGACAATCTCGAGCAAGTTGCAGACCTTGCTTGGAATTTCACTCATAGAGCTTTTGTCTAGGCATCCTTCTGATGAGGTCTATCTTGGACAGAGAGACACACATGACTGGACTTCAGACAATGAACCATTACAAGCATTCGACAGATTCAGTAAGAAGCTGGTTGGAATCGAATATAAGATTATTGAAAGGAACAGCAATGGAAGGTGGAAGAACAGGGTTGGACCAGCAAAGCTGCCATACACACTGCTCTATCCTTCAAGTGAGGCAGGGCTCACTGGCAGGGGAATTCCCAACAGCATATCAATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_26036.p1 GENE.R_Transcript_26036~~R_Transcript_26036.p1 ORF type:complete len:932 (+),score=179.73,Lipoxygenase|PF00305.15|0,PLAT|PF01477.19|8.6e-15 R_Transcript_26036:191-2986(+)
MRNLNISAETANVNHVNFPYSNPFSTIKPASLALIQRNPSLYLFSAPKTSSLALTRSRARMSDEVLQAVEPKKQHKEKIDVESGENSEDEVIINGTVILMKKTVLGFHAFHASLMDRVDELAGRKISLQLVSADPANGMKGKLSKPAYLNGWSSTFSGWKSGESAFKISFQWDKDMGIPGGLIIRNEHHHEFYLKNVTLTGFPDHDEVHFVCNSWVYPAECYKKDRIFFSNKTYLPHETPEPLSSYRQEELETLRGNGDGKLEEWDRVYDYAFYNDLGDPDKGPKYVRPVLGGSAEYPYPRRGRTGRAPTKTDPNTESRLPLIKGLDVYVPRDERFGHLKLSDFLAYALKSLSQDLVAGLESVFDKNPNEFNSFQDELDLYEGGIKLPDGPLIEKIKDNIPFEFLKALLQTDGAPLLKFPMPQIIKEDKSAWSTDEEFAREMLAGVNPLVIRSLEEFPPISKLDPKTYGNQNSSITKQHVEQNLDGMGIDEAIKNNKVFILDHHDTLMPYLRKINSTSSKVYATRTVLFLKDDGTLKPLAIELSLPHPDGDQFGAISKVFTPARDGIEGSIWQLAKAYVAVNDSGYHQLVSHWSRTHAAMEPFVIATNRQLSVLHPICKLLHPHFRDTMDINALARQILLNAEGLLEKTVFPGKYAMEWSSATYKDWVFTEQAVPRDLIKRGMAVKDLESPSGYRLLIEDYPYAVDGLEIWSAIEVWVKDYCSFYYKSDDMIANDTELQSWWKEIREEGHGDKKDEKWWPEMKTIDELTETCTTIIWVASALHAAVNFGQYPYAGYHPNRPTISRRFMPEPNTPEYEELKTQPEKVFLKTISSKLQTLLGISLIELLSRHPSDEVYLGQRDTHDWTSDNEPLQAFDRFSKKLVGIEYKIIERNSNGRWKNRVGPAKLPYTLLYPSSEAGLTGRGIPNSISI*

Click here to download the sequence:
Link to NCBI Protein BLAST