Transcript Information: R_Transcript_260398.p1


Annotated TAIR IDAT3G54070.1
Annotated Gene NameAnkyrin repeat family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:20021330-20023603 | Reverse length=574
E-Value9E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.099825365362436
Replicate 30.16206795196774
Condition 3: 24 Hour
Replicate 10.30747063251389
Replicate 20
Replicate 30.09771296735222


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_260398.p1 GENE.R_Transcript_260398~~R_Transcript_260398.p1 ORF type:3prime_partial len:224 (+),score=37.88,Ank_2|PF12796.3|1.7e-06,Ank_2|PF12796.3|5.3e-09,Ank_5|PF13857.2|0.048,Ank_5|PF13857.2|0.015,Ank_5|PF13857.2|0.11,Ank_5|PF13857.2|0.089,Ank_4|PF13637.2|3.3e+03,Ank_4|PF13637.2|1.2,Ank_4|PF13637.2|75,Ank_4|PF13637.2|0.00014,Ank_3|PF13606.2|9.3e+02,Ank_3|PF13606.2|80,Ank_3|PF13606.2|2,Ank_3|PF13606.2|8.9 R_Transcript_260398:73-741(+)
ATGGGAATTTGTTCATCAAGAGCCAAACATGAGAGCGACATTGGTACCGGAAGGATATCAACTCGACATGCAAGAGGGAGGGTGGATAACAAGTTGAAGGATCTAGGAAGTTACTTACCATTGTACAAGGCAGCACTAAAAGGTGAATGGAACAAAGCAAGGAAATTCATTGACGAAGATCCAGAAGCTCTGACAGCAAGGATAAGCATAGCCTCAGAAACAGCACTCCATATAGCAGTAGGCACAGGGGAATCAATCGAGTTTGTGGAGAAACTGGTGCTAAAGTTGTCACCACAGGACTTAGCACTTACTGACCAGAATGGAGAGACTCCCCTTTCTGTCGCGGCTGTGGTTGGCAATCTTAAGGCAGCCATGTTACTTGTCAATAAGAACCCTGACTTGCCAAGTATTTCTGGCAAATCTGGTTTCCCTATTCATAGGGCTGCTCAATATGGCCATAGAGATATGCTTCACTATCTAATGGATGTCACTAGACTTGATCTTGAGCCTAGTCCTTTTGCTGGCAAATCTGGTTGTGAACTTCTCAATGCTGTGATTACAGCTGAGTTTTTCGGTATGTTTGTTATCATTCAGTTTCATTGCCAGCAATGTTATGCCCACTTTCACTTTAAATTGCAAATTTTGCCTCTTGTGTTGTCTCACAAAGTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_260398.p1 GENE.R_Transcript_260398~~R_Transcript_260398.p1 ORF type:3prime_partial len:224 (+),score=37.88,Ank_2|PF12796.3|1.7e-06,Ank_2|PF12796.3|5.3e-09,Ank_5|PF13857.2|0.048,Ank_5|PF13857.2|0.015,Ank_5|PF13857.2|0.11,Ank_5|PF13857.2|0.089,Ank_4|PF13637.2|3.3e+03,Ank_4|PF13637.2|1.2,Ank_4|PF13637.2|75,Ank_4|PF13637.2|0.00014,Ank_3|PF13606.2|9.3e+02,Ank_3|PF13606.2|80,Ank_3|PF13606.2|2,Ank_3|PF13606.2|8.9 R_Transcript_260398:73-741(+)
MGICSSRAKHESDIGTGRISTRHARGRVDNKLKDLGSYLPLYKAALKGEWNKARKFIDEDPEALTARISIASETALHIAVGTGESIEFVEKLVLKLSPQDLALTDQNGETPLSVAAVVGNLKAAMLLVNKNPDLPSISGKSGFPIHRAAQYGHRDMLHYLMDVTRLDLEPSPFAGKSGCELLNAVITAEFFGMFVIIQFHCQQCYAHFHFKLQILPLVLSHKV

Click here to download the sequence:
Link to NCBI Protein BLAST