Transcript Information: R_Transcript_26048.p1


Annotated TAIR IDAT1G55020.1
Annotated Gene Namelipoxygenase 1
Annotated Gene Symbol(s)LOX1, ATLOX1
Annotation TypeOrtholog
Chromosome Positionchr1:20525798-20530143 | Forward length=859
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.1579003370118
Replicate 24.425229235722
Replicate 36.3344491110437
Condition 2: 8 Hour
Replicate 15.6365070282149
Replicate 210.027301274074
Replicate 38.112603251862
Condition 3: 24 Hour
Replicate 18.0644016420186
Replicate 25.5385403492033
Replicate 36.3798242360912


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_26048.p1 GENE.R_Transcript_26048~~R_Transcript_26048.p1 ORF type:5prime_partial len:669 (+),score=118.41,Lipoxygenase|PF00305.15|0 R_Transcript_26048:2-2008(+)
AAGCTTGAGGAATGGGATCGCGTCTATGATTATGCATACTACAATGATCTAGGAGATCCCGACAGTGGAGCAGAATATGTCCGGCCAATACTTGGAGGATCCAAGGATTATCCATATCCACGCAGAGGAAGAACAGGCCGTGCACCAACTAAGACAGATCCCAATTGCGAGAGCAGACTGCCACCAGTAATGAGCATGGACATCTACGTTCCAAGGGATGAACGGTTTGGACACCTAAAGATGGCTGATTTCCTGTCTCACTCACTAAAAGCTGTAGCTCATGGTCTGCAGGCTCAGCTTAAGGCTTTGTTTGACAGGACACCTACAGAATTTGATACTTTTGAAGATGCATTGAGAATGTACGAAAAAGGAATCAAACTCCCAGATGAGACTCTTCTCAATGAGAAAACTTATTTGGATATGTTGAAAGGGCTGCTTAGAATTGATGGAGCTCCCATACTCAAATTTCCATTGCCTCATGTAATCAAAGAGGACCATTTGGCATGGACTAATGATGAAGAGTTTGCAAGGGAGATGCTTGCAGGAGTAAATCCTGTTCTAATTCAACGTCTTGTGGAATTTCCTCCAGTGAGCAAGCTAGACCCTTGTGTATATGGAAATCAAAGTAGTAAAATGACTAGAGAGCACATAGAGGGAAAATTAGGTGGAATGACTGTGGAAGAGGCAATGGAGCACAACAAGCTATTTATATTAGATCATCATGACACGTTGATGCCTTACCTGAGGCGCGTAAATACAACTTCCACAAAGACTTATGCCACCAGAACACTTCTCTTCTTGAAAAATGACGGAACCTTGAGGCCATTGGCAATTGAGTTGAGCTTGCCACATCCAAATGGAGATCAGCTTGGTGCTGTGAGCGAAGTTTACGCACCAGCTGAAGATGGAGTTGAAAGACACATTTGGCAGCTAGCTAAAGCCTATGTGTCTGTCAATGATTCTGGATACCATCAACTTATCAGCCACTGGTTGAACACACACGCAGTCATTGAACCTTTCGTGATAGCAACAAATAGGCAGCTAAGTGTGCTTCATCCAATCCATAAGCTTCTGCAACCTCATTTCCGTGACACCATGAGCATAAATGCATTAGCTCGGCAAATCCTCATTGGAGCTGGGGGAATACTTGAGGTAACTGTTTTCCCACGAAAGTATGCCATGGAAATGTCATCTTTGTTGTACAAGAACTGGGTTTTCACAGACCAAGCACTTCCCAAAGACCTTGTTAAGAGAGGAATGGCAGTTAAGGACTCAGAAAGCCCTCATGGATATCGGCTACTCATAGAGGATTATCCATATGCAGTTGACGGCCTAGATGTATGGTCAGCTATTGAATCCTGGGTGAAAGACTACTGCTCATACTGCTACAAGGATGACGAGATGATCATCAATGACACAGAACTGCAAGCCTGGTGGAAGGAAGTTCGGGAGAAGGGCCATGGTGACTTGAAGGACAAGCAATGGTGGCCTGAAATGAACAACTTGGAAGAACTAACAGAAACTTGTACAATCATAATATGGGTGGCTTCTGCTCTTCATGCAGCAGTTAACTTTGGGCAGTACCCTTATGCAGGGTACCTTCCGAACAGACCAACTGTCAGTCGAAGGTTCATGCCTGAGCCAGGCACCCCAGAGTACGAGGAGCTCACGAGAAACCCTGAGACTGCTTATCTCAAAACCATAACCAGCCAATTTCAGACCCTTCTTGGCATTTCACTCATCGAGATTCTATCGAGACATTCCTCTGATGAGGTCTATCTAGGCCAGAGAGACACTCGCGAATGGACTTCAGACACTGCACCAATGGAAGCATTTGACAGATTTAGGCAAAGACTAGAGGAAATTGAACGTGAGATCGTAGAAAGAAATGACAGCAGGAAGTATAGGAACAGGTTTGGACCCGTTAATATGCCCTACACATTGCTCATCCCTTCAAGTGAGGGAGGACTCACAGCCAGGGGAATTCCCAACAGTGTCACAATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_26048.p1 GENE.R_Transcript_26048~~R_Transcript_26048.p1 ORF type:5prime_partial len:669 (+),score=118.41,Lipoxygenase|PF00305.15|0 R_Transcript_26048:2-2008(+)
KLEEWDRVYDYAYYNDLGDPDSGAEYVRPILGGSKDYPYPRRGRTGRAPTKTDPNCESRLPPVMSMDIYVPRDERFGHLKMADFLSHSLKAVAHGLQAQLKALFDRTPTEFDTFEDALRMYEKGIKLPDETLLNEKTYLDMLKGLLRIDGAPILKFPLPHVIKEDHLAWTNDEEFAREMLAGVNPVLIQRLVEFPPVSKLDPCVYGNQSSKMTREHIEGKLGGMTVEEAMEHNKLFILDHHDTLMPYLRRVNTTSTKTYATRTLLFLKNDGTLRPLAIELSLPHPNGDQLGAVSEVYAPAEDGVERHIWQLAKAYVSVNDSGYHQLISHWLNTHAVIEPFVIATNRQLSVLHPIHKLLQPHFRDTMSINALARQILIGAGGILEVTVFPRKYAMEMSSLLYKNWVFTDQALPKDLVKRGMAVKDSESPHGYRLLIEDYPYAVDGLDVWSAIESWVKDYCSYCYKDDEMIINDTELQAWWKEVREKGHGDLKDKQWWPEMNNLEELTETCTIIIWVASALHAAVNFGQYPYAGYLPNRPTVSRRFMPEPGTPEYEELTRNPETAYLKTITSQFQTLLGISLIEILSRHSSDEVYLGQRDTREWTSDTAPMEAFDRFRQRLEEIEREIVERNDSRKYRNRFGPVNMPYTLLIPSSEGGLTARGIPNSVTI*

Click here to download the sequence:
Link to NCBI Protein BLAST