Transcript Information: R_Transcript_26053.p1


Annotated TAIR IDAT3G52150.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19342074-19343090 | Forward length=253
E-Value5.8E-85
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.550234309052
Replicate 27.5035958864803
Replicate 310.514568076922
Condition 2: 8 Hour
Replicate 111.640821040494
Replicate 212.243499237633
Replicate 310.652912462457
Condition 3: 24 Hour
Replicate 110.236923878583
Replicate 28.5328542593053
Replicate 311.482074589848


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_26053.p1 GENE.R_Transcript_26053~~R_Transcript_26053.p1 ORF type:3prime_partial len:305 (+),score=68.81,RRM_1|PF00076.18|2.2e-17,RRM_1|PF00076.18|1.9e-17,RRM_6|PF14259.2|2.6e-13,RRM_6|PF14259.2|3.3e-12,RRM_5|PF13893.2|0.0076,RRM_5|PF13893.2|0.00015,RRM_7|PF16367.1|0.22,RRM_7|PF16367.1|0.15 R_Transcript_26053:130-1041(+)
ATGGCAAGCATGTCACTGTCCTTTCTTCCATCTCCTAGTCTCTTCAATCACTCTTCAACCCCACAAACACCCACAAAGCCCACATCATTACCCTCCTTACACTGTTTCAATTATTGTAATATATCTTATCATGGGTTTTCTGGGCTCAAAATGAAGCCCAGAATCTCGAAAAACCCACCTTTGATGATAAGGGTCAGAGCTGCTGTAGCTGAAGAGACTTCATCTCCTCCATCTTCTTCTTCTTCGGAGACAAATGAAGAAGCTGCTAGAAGGGTTTACATTGGTAACATTCCTAGGAATGTCAACAATGATGAACTCACTCGTATTGTTGAAGAACATGGTGCTGTTGTAAAAGCTGAGGTCATGTATGACAAATATTCTGGAAGGAGCAGAAGGTTTGGTTTTGCTACCATGAAGGCTGTTGAGGATGCCACTGCAGTTGTCGAGAAGTTGAATGGCAAGGAAATCGGAGGACGTCAAATCAAAGCTAATATAACTGAGAAACCTTTGCAAGCTGTGGATTTATCAGCTCTCCAGGCCGATGAATCTCAATTCGTTGACAGTGGGCACAAAGTTTATGTTGGCAATCTTGCAAAGACAGTTACCTCTGATACATTGAAGAGTTTCTTTTCCGAGAAGGGAAATGTTGTCAGTGCAAAGGTTCAACGGGCACCAGGAACCTCGAAGTCTAGTGGATATGGGTTTGTCTGTTTCTCTTCAGATGAGGAGGCAGAGGCTGCAATTACAGCCTTGAACAATGCTGACTTGGAAGGGCAAAAAAATACGCGTAAACAAAGCTTAGCAGTCATGAGATATTTGATGTTTCAGGGATGGGGATGCTGTAGTTCGAATGTACCATTGCCTATTTTTTGTAGTACTAAGTGCATGGTAAAGTTGATCAAAAGACTTGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_26053.p1 GENE.R_Transcript_26053~~R_Transcript_26053.p1 ORF type:3prime_partial len:305 (+),score=68.81,RRM_1|PF00076.18|2.2e-17,RRM_1|PF00076.18|1.9e-17,RRM_6|PF14259.2|2.6e-13,RRM_6|PF14259.2|3.3e-12,RRM_5|PF13893.2|0.0076,RRM_5|PF13893.2|0.00015,RRM_7|PF16367.1|0.22,RRM_7|PF16367.1|0.15 R_Transcript_26053:130-1041(+)
MASMSLSFLPSPSLFNHSSTPQTPTKPTSLPSLHCFNYCNISYHGFSGLKMKPRISKNPPLMIRVRAAVAEETSSPPSSSSSETNEEAARRVYIGNIPRNVNNDELTRIVEEHGAVVKAEVMYDKYSGRSRRFGFATMKAVEDATAVVEKLNGKEIGGRQIKANITEKPLQAVDLSALQADESQFVDSGHKVYVGNLAKTVTSDTLKSFFSEKGNVVSAKVQRAPGTSKSSGYGFVCFSSDEEAEAAITALNNADLEGQKNTRKQSLAVMRYLMFQGWGCCSSNVPLPIFCSTKCMVKLIKRLE

Click here to download the sequence:
Link to NCBI Protein BLAST