Transcript Information: R_Transcript_260583.p1


Annotated TAIR IDAT4G28010.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:13930379-13932493 | Forward length=704
E-Value3.6E-170
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.310986145919
Replicate 20.58000829879276
Replicate 31.2339264727209
Condition 2: 8 Hour
Replicate 10.9131468972039
Replicate 21.2354078365296
Replicate 32.0307741163693
Condition 3: 24 Hour
Replicate 11.9025807094782
Replicate 21.2489856554056
Replicate 32.3278359957059


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_260583.p1 GENE.R_Transcript_260583~~R_Transcript_260583.p1 ORF type:complete len:724 (+),score=152.39,PPR_2|PF13041.2|0.069,PPR_2|PF13041.2|3.7e-09,PPR_2|PF13041.2|2.7e-18,PPR_2|PF13041.2|5.2e-18,PPR_2|PF13041.2|4.2e-13,PPR_2|PF13041.2|2.6e-15,PPR_2|PF13041.2|7.4e-06,PPR_2|PF13041.2|1.7e-13,PPR_2|PF13041.2|12,PPR_2|PF13041.2|1.1e-13,PPR_2|PF13041.2|1.1e-10,PPR_2|PF13041.2|3.5e-14,PPR_2|PF13041.2|5.3e-07,PPR_2|PF13041.2|2.9e-08,PPR_2|PF13041.2|0.00038,PPR_1|PF12854.3|31,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|6e-11,PPR_1|PF12854.3|5.6e-14,PPR_1|PF12854.3|8.8e-08,PPR_1|PF12854.3|4.9e-08,PPR_1|PF12854.3|3.6e-10,PPR_1|PF12854.3|7.1e-08,PPR_1|PF12854.3|0.00025,PPR_1|PF12854.3|5.8e-09,PPR_1|PF12854.3|0.42,PPR_1|PF12854.3|0.0013,PPR_1|PF12854.3|4.8e-10,PPR_1|PF12854.3|0.2,PPR_1|PF12854.3|0.0002,PPR_1|PF12854.3|2.7e-05,PPR_1|PF12854.3|1.3e+03,PPR|PF01535.16|0.12,PPR|PF01535.16|4,PPR|PF01535.16|3.3e-08,PPR|PF01535.16|7.2e-11,PPR|PF01535.16|2e-07,PPR|PF01535.16|1e-05,PPR|PF01535.16|4.8e-08,PPR|PF01535.16|6.2e-07,PPR|PF01535.16|0.29,PPR|PF01535.16|1.4e-08,PPR|PF01535.16|0.46,PPR|PF01535.16|0.17,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|0.0099,PPR|PF01535.16|0.0002,PPR|PF01535.16|8.3e-05,PPR|PF01535.16|1.5e+03,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|6.2,PPR_3|PF13812.2|0.0018,PPR_3|PF13812.2|1.1e-06,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|8.7e-06,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|0.056,PPR_3|PF13812.2|0.086,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|1.7e-05,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|0.0036,PPR_3|PF13812.2|0.00023,PPR_3|PF13812.2|2e+03,MRP-S27|PF10037.5|0.0039,MRP-S27|PF10037.5|0.015,MRP-S27|PF10037.5|0.55,MRP-S27|PF10037.5|1.6e+02,ATP13|PF12921.3|31,ATP13|PF12921.3|0.36,ATP13|PF12921.3|0.2,ATP13|PF12921.3|5.8e+02,ATP13|PF12921.3|3.5e+02,ATP13|PF12921.3|2.5e+03,ATP13|PF12921.3|14,TPR_19|PF14559.2|7.5e+03,TPR_19|PF14559.2|3.7e+02,TPR_19|PF14559.2|62,TPR_19|PF14559.2|36,TPR_19|PF14559.2|34,TPR_19|PF14559.2|2.1e+02,TPR_19|PF14559.2|7e+02,TPR_19|PF14559.2|2,TPR_19|PF14559.2|1.4e+03,TPR_14|PF13428.2|3.8e+03,TPR_14|PF13428.2|7.9e+03,TPR_14|PF13428.2|4.4e+03,TPR_14|PF13428.2|8,TPR_14|PF13428.2|8.5e+02,TPR_14|PF13428.2|4.3e+02,TPR_14|PF13428.2|6.9e+02,TPR_14|PF13428.2|7.4e+03,TPR_14|PF13428.2|1.4e+03,TPR_14|PF13428.2|94,TPR_14|PF13428.2|1.6e+02,TPR_16|PF13432.2|1e+04,TPR_16|PF13432.2|11,TPR_16|PF13432.2|42,TPR_16|PF13432.2|1.5e+02,TPR_16|PF13432.2|1.9e+02,TPR_16|PF13432.2|4.2e+03,TPR_16|PF13432.2|4.3e+02,SPOB_a|PF14689.2|1.3e+03,SPOB_a|PF14689.2|6.7e+02,SPOB_a|PF14689.2|69,SPOB_a|PF14689.2|69,SPOB_a|PF14689.2|9.5e+02,SPOB_a|PF14689.2|0.94,SPOB_a|PF14689.2|1.1e+03,DUF3368|PF11848.4|2.3e+03,DUF3368|PF11848.4|14,DUF3368|PF11848.4|2.6e+03,DUF3368|PF11848.4|3.1e+02,DUF3368|PF11848.4|3.4e+02,DUF3368|PF11848.4|1.3e+03,DUF3368|PF11848.4|4 R_Transcript_260583:243-2414(+)
ATGCCAAAGAGACTATTTTTCTTTAAACTTCCTTCAAACCCTCGTCATTATGCTCAATTCAACATCCCCTTTAAATTCTCAACTCTCTCATCTCTCTTTTCTGTCCATGAAAATGGGTTAGATTCCCATATAGTATTGCTATGTGGAAAACCCACTTCAATCAAAAAAGCTGCTTGTTTGTTTGATGAAGCCTTTAGCTCAGGCAACAAAACCCCATCTGAGAGAACATGTAATCACCTAGTTAATGAGCTTAGAAAGGCAGGTGAACATGAATTAGCCTTCACAGTCTATAAGAAAATGACCCATTTTGGTTTTAAGCCATTTTTCTTTTCACTGGCTGCTTTGGTTGAGTATTTTGTGCATATAGATAAACCCCACTTTGCATTAGGGGCAATTGGGTCTCTTTTAAAGCATGGTTTTGATGCTAATGTGTATCTTATGAATCTTACTTTGAAAAGTTTTTGTCAAACTGGGGAGGTTAATAGAGCAAGGCAGGTCTTGTGTGGAATGAGGGATTGTTCTGTGGTGCCTAATGTTGTTAGCTATAACACAGTGGTAACTGGTCTTTGTAGGGAAAATAGGATGGTGGATGCTTTGAGTTTGATTGATGAGATGAAGAAATCAGGGTGTTGTCCTGATTTGAAATCTTATACTGCTCTTATAGATGGGTTTTGTAAGAATGGTGAAGTGGAAGATGCTATGGAGTTGATGGATGAGATGAAGAAGAATGGTTTTGATGGGGATGTTGTTACTTATAGTGCACTCATTAGTGGGTTTTGTAATCTAGGTAATGCAGATAGAGGTAAAGAGATTTTTCATGAAATGTTGGGGAAGGGATTGGTTCCCAATGTGCTTACATATGCTAGTTTGGTGCAAGGTCTTTCGAAGTCAGGACGGTGGGAAGAAGCCACAGCAGTGCTGAATGAAATGGCAGAAAGAGGGCTGTATCCTGATCAATATATTTATACTAGTCTGATTGATGGGCTCTGTAAGAATGGCCAGGTGAGGAAAGCTGTTCATCTATTTAATAAACTGCTCGAGAAGGGTGAGGGGCTGGATACTATTGCATACAATGCGCTGATTCATGGATTTTGTAGAGAAGGTTTGATTGCTGAATCCTTTGACTTATTGAAAATGATGTTGGAAAAGGGCAAGAAGCCTGATCTGTGGACATACGAAATAGTGCTTAGGGGTCTTTTTGACTCTGGTAAAGTCGATGAAGCATTAGCAATATTCAGTTCGGTGTTTGAAGACAAGGGTTATATTCAGCCACAAGTAACAACATATAACACAATGATCCTCGGGCTTTGCAAGGAAGGTTGTTTTGAAGAGGCTTTACAGTTTTATGATAAGATGGTAGCAGCAGGTCACTCTGGTAATTCATTCACTTATAATGTACTGATTTGGGCGTCTCTGAGGGAAGGGAGAGTTGCTAAAGCTATAGAACACTGGAAAAACATTTCCAACGCTGGATTAGTTCCAGATTCACACACCTTTAGCCACATGATAGATGGATTCTGCAAACTACAAATGACAAACATTGCAAAAGGTATTTTGCTGAAGTTGAAAGCCCTTGGGTTTTGTCCAACAGTGATGGACTATAATACCTTGATGTCAACCTTGTGTAGAGAAGGTAGTTTGGAGCAAGCAAAGAGGTTGTTCGAAGAAATGAAGGAAACAAACTGCAAACCAGATATTATCTCCTTCAATACAATGATGTGTGGAGCCCTTAAAGCTGGTGATTACGATTATGTCAAATCACTGCTCAATGATTTGCATCAAAGGGGTTTGGTCCTGGATGGTGTCTCCTTTGCCACGCTAATTGTTGGGTTGGTGAAGATTGGGCAGTTGGATGAAGCCAAACAAATTTTGAAAAGGATGGTTGCTAGTGGCTTCACACCTACTACTCCTGTTTATGATTCTCTACTGAAAGCTTATTGTGAGAATGGTGATATGGATGAAGTTATTAACCTGCTACATCGAATGGCAGCTGAGAACATTGTGCTTGACTCTGATATCAGAGCTACTATCTTGTCATGTCTGTGTCAAAATGCTGATTTTGATATGGTGGATCGTATGCCAACATTCTCTCAAGAAGAAGCTTTAGAAGAAGATGTCATCCCCTGCAAAGATTTCCTGGCAGAACTTCAAAAGCTCCATTCCGATTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_260583.p1 GENE.R_Transcript_260583~~R_Transcript_260583.p1 ORF type:complete len:724 (+),score=152.39,PPR_2|PF13041.2|0.069,PPR_2|PF13041.2|3.7e-09,PPR_2|PF13041.2|2.7e-18,PPR_2|PF13041.2|5.2e-18,PPR_2|PF13041.2|4.2e-13,PPR_2|PF13041.2|2.6e-15,PPR_2|PF13041.2|7.4e-06,PPR_2|PF13041.2|1.7e-13,PPR_2|PF13041.2|12,PPR_2|PF13041.2|1.1e-13,PPR_2|PF13041.2|1.1e-10,PPR_2|PF13041.2|3.5e-14,PPR_2|PF13041.2|5.3e-07,PPR_2|PF13041.2|2.9e-08,PPR_2|PF13041.2|0.00038,PPR_1|PF12854.3|31,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|6e-11,PPR_1|PF12854.3|5.6e-14,PPR_1|PF12854.3|8.8e-08,PPR_1|PF12854.3|4.9e-08,PPR_1|PF12854.3|3.6e-10,PPR_1|PF12854.3|7.1e-08,PPR_1|PF12854.3|0.00025,PPR_1|PF12854.3|5.8e-09,PPR_1|PF12854.3|0.42,PPR_1|PF12854.3|0.0013,PPR_1|PF12854.3|4.8e-10,PPR_1|PF12854.3|0.2,PPR_1|PF12854.3|0.0002,PPR_1|PF12854.3|2.7e-05,PPR_1|PF12854.3|1.3e+03,PPR|PF01535.16|0.12,PPR|PF01535.16|4,PPR|PF01535.16|3.3e-08,PPR|PF01535.16|7.2e-11,PPR|PF01535.16|2e-07,PPR|PF01535.16|1e-05,PPR|PF01535.16|4.8e-08,PPR|PF01535.16|6.2e-07,PPR|PF01535.16|0.29,PPR|PF01535.16|1.4e-08,PPR|PF01535.16|0.46,PPR|PF01535.16|0.17,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|0.0099,PPR|PF01535.16|0.0002,PPR|PF01535.16|8.3e-05,PPR|PF01535.16|1.5e+03,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|6.2,PPR_3|PF13812.2|0.0018,PPR_3|PF13812.2|1.1e-06,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|8.7e-06,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|0.056,PPR_3|PF13812.2|0.086,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|1.7e-05,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|0.0036,PPR_3|PF13812.2|0.00023,PPR_3|PF13812.2|2e+03,MRP-S27|PF10037.5|0.0039,MRP-S27|PF10037.5|0.015,MRP-S27|PF10037.5|0.55,MRP-S27|PF10037.5|1.6e+02,ATP13|PF12921.3|31,ATP13|PF12921.3|0.36,ATP13|PF12921.3|0.2,ATP13|PF12921.3|5.8e+02,ATP13|PF12921.3|3.5e+02,ATP13|PF12921.3|2.5e+03,ATP13|PF12921.3|14,TPR_19|PF14559.2|7.5e+03,TPR_19|PF14559.2|3.7e+02,TPR_19|PF14559.2|62,TPR_19|PF14559.2|36,TPR_19|PF14559.2|34,TPR_19|PF14559.2|2.1e+02,TPR_19|PF14559.2|7e+02,TPR_19|PF14559.2|2,TPR_19|PF14559.2|1.4e+03,TPR_14|PF13428.2|3.8e+03,TPR_14|PF13428.2|7.9e+03,TPR_14|PF13428.2|4.4e+03,TPR_14|PF13428.2|8,TPR_14|PF13428.2|8.5e+02,TPR_14|PF13428.2|4.3e+02,TPR_14|PF13428.2|6.9e+02,TPR_14|PF13428.2|7.4e+03,TPR_14|PF13428.2|1.4e+03,TPR_14|PF13428.2|94,TPR_14|PF13428.2|1.6e+02,TPR_16|PF13432.2|1e+04,TPR_16|PF13432.2|11,TPR_16|PF13432.2|42,TPR_16|PF13432.2|1.5e+02,TPR_16|PF13432.2|1.9e+02,TPR_16|PF13432.2|4.2e+03,TPR_16|PF13432.2|4.3e+02,SPOB_a|PF14689.2|1.3e+03,SPOB_a|PF14689.2|6.7e+02,SPOB_a|PF14689.2|69,SPOB_a|PF14689.2|69,SPOB_a|PF14689.2|9.5e+02,SPOB_a|PF14689.2|0.94,SPOB_a|PF14689.2|1.1e+03,DUF3368|PF11848.4|2.3e+03,DUF3368|PF11848.4|14,DUF3368|PF11848.4|2.6e+03,DUF3368|PF11848.4|3.1e+02,DUF3368|PF11848.4|3.4e+02,DUF3368|PF11848.4|1.3e+03,DUF3368|PF11848.4|4 R_Transcript_260583:243-2414(+)
MPKRLFFFKLPSNPRHYAQFNIPFKFSTLSSLFSVHENGLDSHIVLLCGKPTSIKKAACLFDEAFSSGNKTPSERTCNHLVNELRKAGEHELAFTVYKKMTHFGFKPFFFSLAALVEYFVHIDKPHFALGAIGSLLKHGFDANVYLMNLTLKSFCQTGEVNRARQVLCGMRDCSVVPNVVSYNTVVTGLCRENRMVDALSLIDEMKKSGCCPDLKSYTALIDGFCKNGEVEDAMELMDEMKKNGFDGDVVTYSALISGFCNLGNADRGKEIFHEMLGKGLVPNVLTYASLVQGLSKSGRWEEATAVLNEMAERGLYPDQYIYTSLIDGLCKNGQVRKAVHLFNKLLEKGEGLDTIAYNALIHGFCREGLIAESFDLLKMMLEKGKKPDLWTYEIVLRGLFDSGKVDEALAIFSSVFEDKGYIQPQVTTYNTMILGLCKEGCFEEALQFYDKMVAAGHSGNSFTYNVLIWASLREGRVAKAIEHWKNISNAGLVPDSHTFSHMIDGFCKLQMTNIAKGILLKLKALGFCPTVMDYNTLMSTLCREGSLEQAKRLFEEMKETNCKPDIISFNTMMCGALKAGDYDYVKSLLNDLHQRGLVLDGVSFATLIVGLVKIGQLDEAKQILKRMVASGFTPTTPVYDSLLKAYCENGDMDEVINLLHRMAAENIVLDSDIRATILSCLCQNADFDMVDRMPTFSQEEALEEDVIPCKDFLAELQKLHSDF*

Click here to download the sequence:
Link to NCBI Protein BLAST