Transcript Information: R_Transcript_260674.p1


Annotated TAIR IDAT5G44200.1
Annotated Gene NameCAP-binding protein 20
Annotated Gene Symbol(s)CBP20, ATCBP20
Annotation TypeOrtholog
Chromosome Positionchr5:17802062-17803875 | Reverse length=257
E-Value1.1E-86
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.26453566601042
Replicate 20.15214710446593
Replicate 31.1619359650222
Condition 2: 8 Hour
Replicate 11.0646028237933
Replicate 20.81017687830383
Replicate 31.4468675132192
Condition 3: 24 Hour
Replicate 11.497248297459
Replicate 20.15982071659839
Replicate 30.15860655570216


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_260674.p1 GENE.R_Transcript_260674~~R_Transcript_260674.p1 ORF type:3prime_partial len:138 (+),score=20.84,RRM_1|PF00076.18|3.5e-14,RRM_6|PF14259.2|1.3e-08,RRM_5|PF13893.2|6.2e+03,RRM_5|PF13893.2|4.9e-08 R_Transcript_260674:1090-1500(+)
ATGGAACCTCTTCCCCCAGGCCTGGTGGATCCAAGCAAGCTCTCAGCTTACCGAGATAGAAGATTTCCGGGAAACCAAGAAGAATTTGAGGAAGCACTAAAGAACTCAACTACTGTCTATATAGGGAACATGTCTTTCTACACAACAGAAGAGCAAGTTTATGAGCTATTTTCTCGTGTTGGAGAAATTAAAAAGATGATCATGGGCTTGGATAAAAACACAAAAACCCCTTGCGGCTTTTGTTTCGTGTTGTATTACTCTAGAGAAGACACCGAGGATGCTGTCAAGTATATAAGTGGAACGATTCTTGATGACCGCCCTATCCGTGTAGACTTTGACTGGGGATTTCAAGAAGGGAGGCAATGGGGACGTGGTCGAAGTGGCGGTCAGGTAAGGGATGAATACCGTACA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_260674.p1 GENE.R_Transcript_260674~~R_Transcript_260674.p1 ORF type:3prime_partial len:138 (+),score=20.84,RRM_1|PF00076.18|3.5e-14,RRM_6|PF14259.2|1.3e-08,RRM_5|PF13893.2|6.2e+03,RRM_5|PF13893.2|4.9e-08 R_Transcript_260674:1090-1500(+)
MEPLPPGLVDPSKLSAYRDRRFPGNQEEFEEALKNSTTVYIGNMSFYTTEEQVYELFSRVGEIKKMIMGLDKNTKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQEGRQWGRGRSGGQVRDEYRT

Click here to download the sequence:
Link to NCBI Protein BLAST