Transcript Information: R_Transcript_260677.p1


Annotated TAIR IDAT5G44200.1
Annotated Gene NameCAP-binding protein 20
Annotated Gene Symbol(s)CBP20, ATCBP20
Annotation TypeOrtholog
Chromosome Positionchr5:17802062-17803875 | Reverse length=257
E-Value1.8E-144
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 177.864813596519
Replicate 254.990310614114
Replicate 366.902217741144
Condition 2: 8 Hour
Replicate 170.056780265729
Replicate 277.02081523075
Replicate 380.817885381247
Condition 3: 24 Hour
Replicate 182.720987947442
Replicate 274.917863533072
Replicate 382.426316459784


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_260677.p1 GENE.R_Transcript_260677~~R_Transcript_260677.p1 ORF type:complete len:252 (+),score=51.32,RRM_1|PF00076.18|1.3e-13,RRM_6|PF14259.2|4.8e-08,RRM_5|PF13893.2|1.7e-07 R_Transcript_260677:164-919(+)
ATGGCTTTGTTGTTCAAGGATCCAAGCAAGCTCTCAGCTTACCGAGATAGAAGATTTCCGGGAAACCAAGAAGAATTTGAGGAAGCACTAAAGAACTCAACTACTGTCTATATAGGGAACATGTCTTTCTACACAACAGAAGAGCAAGTTTATGAGCTATTTTCTCGTGTTGGAGAAATTAAAAAGATGATCATGGGCTTGGATAAAAACACAAAAACCCCTTGCGGCTTTTGTTTCGTGTTGTATTACTCTAGAGAAGACACCGAGGATGCTGTCAAGTATATAAGTGGAACGATTCTTGATGACCGCCCTATCCGTGTAGACTTTGACTGGGGATTTCAAGAAGGGAGGCAATGGGGACGTGGTCGAAGTGGCGGTCAGGTAAGGGATGAATACCGTACAGACTATGATCCTGGCAGAGGTGGTTACGGAAAATTGGTTCAAAAAGAGCTAGACGCCCGACAACTTGTAGACTATGGTACTGGTTCGCTTGGAGCTTTTGCACCAGTTATGCCGGCTCAATATGGTAGGCATGAAAGGAACCGTGGACATGGAGGTTCTTATCGATACAGTAGAGATCATTATAGGAAGAGACCTCGTGAGGATGACCGTAAACCTGCTGAGATGTCAAAGAGAAGTGAGCATGAATCACGTAGAAACTCTGACCATGAATCTAGACCGGAGAAAAACCCTCGTTTCCGTGAAAGTGGTGACTCTGATGATGATGAAGATGATGACAGAAAACGCCGTAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_260677.p1 GENE.R_Transcript_260677~~R_Transcript_260677.p1 ORF type:complete len:252 (+),score=51.32,RRM_1|PF00076.18|1.3e-13,RRM_6|PF14259.2|4.8e-08,RRM_5|PF13893.2|1.7e-07 R_Transcript_260677:164-919(+)
MALLFKDPSKLSAYRDRRFPGNQEEFEEALKNSTTVYIGNMSFYTTEEQVYELFSRVGEIKKMIMGLDKNTKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQEGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELDARQLVDYGTGSLGAFAPVMPAQYGRHERNRGHGGSYRYSRDHYRKRPREDDRKPAEMSKRSEHESRRNSDHESRPEKNPRFRESGDSDDDEDDDRKRRN*

Click here to download the sequence:
Link to NCBI Protein BLAST