Transcript Information: R_Transcript_26080.p1


Annotated TAIR IDAT4G16360.3
Annotated Gene Name5'-AMP-activated protein kinase beta-2 subunit protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:9245571-9246833 | Forward length=261
E-Value1.4E-129
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.790083428286
Replicate 227.316986008748
Replicate 334.399737428132
Condition 2: 8 Hour
Replicate 135.246089335827
Replicate 233.580009408562
Replicate 335.800754510798
Condition 3: 24 Hour
Replicate 136.621277273258
Replicate 231.899993827894
Replicate 335.82312912423


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_26080.p1 GENE.R_Transcript_26080~~R_Transcript_26080.p1 ORF type:complete len:289 (+),score=86.01,AMPK1_CBM|PF16561.1|6.3e-32,AMPKBI|PF04739.11|2.8e-21 R_Transcript_26080:560-1426(+)
ATGGGGAATGTGAATGGTAGAGAAGATGGGATTGGAAGCCCATCTGGGTCTGGCTCTGGGCTTGTGGCTGAAGAGGAAGAAGAGGATGAGATTATTGGTGGCCCCATCGATGGTGATGTTGATGGTCCAACAGCTAGGATGATGGGTCACTCTCCTCCTCAAAGTCCTTTGGCTGCTCAATCTCCTCTGAAGTTCGGTCCTCAGAACCCTGTGGCTCCTATACAAAAACCTGAAGAGCTGCATATCATGAGTGAGTCTATGATGCACGCTACATCTCTGCCTGAAGATGTCAGTTTCGAGCAAGGAATTCCAACAATGATCACTTGGAGTTCTGGTGGGAAGGAGGTGGCTGTGGAGGGGTCATGGGATAATTGGAAGACAAGGAAACCTCTACAGAGATCAGGGAAGGACTTTACACTCATGAAGGTGCTTCCATCGGGAGTTTACCAGTATAGGTTTGTTGTTGATGGTTCATGGAGATATGCTCCAGATTCACCATGGACCCAAGACGAGAGTGGAAATTTTTACAATGTTTTGGACTTGCAGGATTATGTACCGGAAGACACGGAGAGTATATCTGGGTTTGAGCCACCGCAATCTCCAGATTTTAGCTATGACAACACAGAACTAAGCCAAGACGATTTTGCCAAGGAGCCACCGCTTGTTCCTCCACACCTTCACATGACATTGCTTAACATGCCTTCAACTGGCACAGAGATGCCTCCGCCTCAGTCAAGACCTCAACATGTGGTGCTCAACCATCTTTACATGCAGAAGGGGAAAAGCGGTCCGTCTGTGGTGGCACTTGGTGCTACACACCGGTTCAAGTCCAAGTATGTGACTGTTGTACTCTACAAGTCTCTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_26080.p1 GENE.R_Transcript_26080~~R_Transcript_26080.p1 ORF type:complete len:289 (+),score=86.01,AMPK1_CBM|PF16561.1|6.3e-32,AMPKBI|PF04739.11|2.8e-21 R_Transcript_26080:560-1426(+)
MGNVNGREDGIGSPSGSGSGLVAEEEEEDEIIGGPIDGDVDGPTARMMGHSPPQSPLAAQSPLKFGPQNPVAPIQKPEELHIMSESMMHATSLPEDVSFEQGIPTMITWSSGGKEVAVEGSWDNWKTRKPLQRSGKDFTLMKVLPSGVYQYRFVVDGSWRYAPDSPWTQDESGNFYNVLDLQDYVPEDTESISGFEPPQSPDFSYDNTELSQDDFAKEPPLVPPHLHMTLLNMPSTGTEMPPPQSRPQHVVLNHLYMQKGKSGPSVVALGATHRFKSKYVTVVLYKSL*

Click here to download the sequence:
Link to NCBI Protein BLAST