Transcript Information: R_Transcript_260860.p1


Annotated TAIR IDAT1G54690.1
Annotated Gene Namegamma histone variant H2AX
Annotated Gene Symbol(s)HTA3, H2AXB, G-H2AX, GAMMA-H2AX
Annotation TypeOrtholog
Chromosome Positionchr1:20414607-20415206 | Reverse length=142
E-Value3.3E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 21.126087574736
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_260860.p1 GENE.R_Transcript_260860~~R_Transcript_260860.p1 ORF type:internal len:139 (+),score=17.66,Histone|PF00125.20|4.4e-17,Histone_H2A_C|PF16211.1|2e-07,CBFD_NFYB_HMF|PF00808.19|9.9e+03,CBFD_NFYB_HMF|PF00808.19|9.5e-06 R_Transcript_260860:2-415(+)
AAGTCTCTCTCGCTCTCCGAAGCCCGCTCTCTTTGTTCTCAAGCACACCACCGCCAACCCACTTCCTCATCAAGCATGTCTGCTCGAGGTGCCAAGGGAGGAAAGGTCGCCAAGAATGGCAAGTCGCACACTTCTCGCAGCGCCCGCGCCGGACTGCAGTTTCCCGTTGGGCGTATTCATCGTCTGCTGCGCAAGGGCAACTACGCTGAGCGCATCGGTGCTGGGGCTCCGGTCTACCTGGCCGCCGTCCTGGAGTACCTGGCCGCTGAGGTGCTCGAGTTGGCTGGCAATGCTGCCCGAGACAACAAGAAGAGTCGCATCATTCCGCGCCACCTTCAGCTGGCCATTCGCAATGATGAGGAGCTCAACAAGCTGTTGGCTCACGTGACTCTTGCTGAGGCTGGCGTTCTTCCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_260860.p1 GENE.R_Transcript_260860~~R_Transcript_260860.p1 ORF type:internal len:139 (+),score=17.66,Histone|PF00125.20|4.4e-17,Histone_H2A_C|PF16211.1|2e-07,CBFD_NFYB_HMF|PF00808.19|9.9e+03,CBFD_NFYB_HMF|PF00808.19|9.5e-06 R_Transcript_260860:2-415(+)
KSLSLSEARSLCSQAHHRQPTSSSSMSARGAKGGKVAKNGKSHTSRSARAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLAHVTLAEAGVLP

Click here to download the sequence:
Link to NCBI Protein BLAST