Transcript Information: R_Transcript_26089.p1


Annotated TAIR IDAT3G17510.1
Annotated Gene NameCBL-interacting protein kinase 1
Annotated Gene Symbol(s)CIPK1, SnRK3.16
Annotation TypeOrtholog
Chromosome Positionchr3:5989309-5992627 | Reverse length=444
E-Value2.1E-213
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.150891887126
Replicate 231.930916388024
Replicate 334.786161688687
Condition 2: 8 Hour
Replicate 125.771774703775
Replicate 231.363950241138
Replicate 333.800920433149
Condition 3: 24 Hour
Replicate 128.031633332733
Replicate 226.060918601557
Replicate 328.736592586736


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_26089.p1 GENE.R_Transcript_26089~~R_Transcript_26089.p1 ORF type:complete len:457 (+),score=69.24,Pkinase|PF00069.21|1.4e-71,Pkinase|PF00069.21|2e+03,Pkinase_Tyr|PF07714.13|5.1e-39,Pkinase_Tyr|PF07714.13|4.9e+02,NAF|PF03822.10|8.6e-16,Kinase-like|PF14531.2|63,Kinase-like|PF14531.2|3.3e-06 R_Transcript_26089:289-1659(+)
ATGGTGAGAGAAGTAGAAGAAGAGAGAGGAGGGAAGGGAATGCGATTAGGGAAATATGAATTAGGAAGAATTTTAGGTGAAGGGAATTTTGGCAAAGTTAAATTTGCTAGGAATATTGAAACTGGACAACCTTTTGCTGTTAAGATTTTGGAGAAGAAGAAAATCCTCAATCTCAAGATCACTGATCAGATTAAGAGAGAAATTGCCACCTTGAAGCTTCTCAAACATCCAAACGTAGTTAGATTGTACGAGGTTTTGGCAAGCAAAACAAAGATATATATGGTCTTAGAATATGTGAATGGAGGAGAATTGTTCGACAAAATTGCATCCCGAGGAAAACTCCCAGAAAAGATAGGCCGCAGGCTCTTCCAACAATTAATTGATGGTGTCAGCTACTGTCACGATAAGGGTGTCTTCCACCGCGATCTTAAGTTGGAGAACATCCTCATAGATGGAAAAGGAAACATAAAAGTCTCTGATTTTGGCCTTAGTGCATTACCACAACACTTTGGGAGTGATGGGTTGCTACATACAACCTGTGGAAGTCCAAACTACGTCGCTCCTGAGATACTTGCTAACAGAGGATACAATGGCGCCACAGCTGACGTTTGGTCATGTGGCGTTATTCTTTATGTAATTCTCACTGGTTATCTTCCTTTCGACGATAGAAATCTTGCAGTTCTTTATCAGAAGATCACGAGAGGAGATGTTCAGATACCCAAATGGCTATCTACAGGAGCCCAAAGGATGATAAAGAGGATCCTCGATCCAAACCCTGTAACCCGGATAACAATAGCCGAAATTAAATCAGATGCTTGGTTTAGCCAAGGTTATGCTCCAGCAAATACTGATGATGACGAAGATAATGTATATATCGACGAGGAAGCCTTATCCATAAAAGAAGTGATGCAGAAATCAGATGGAGAGAAAATTCCCGGGTTTCCTACCGTTATCAATGCCTTTCAGCTAATCGGAATGTCCTCATACCTTGACCTCTCAGGGTTTTTCGAGCCTGAGGATGTGTCGGAAAGAAAAATCAGATTTACATCCAATCTTTCTCACAAAGAGTTGCTGGAGAGAATTGAGAACATCGTGACGGGGATGGGATATTGTGTTCAAAAGAAAAATGGAAGGCTAAAAGTTGTGCAAAAGCAAAGAGGCCATAGGAGTCCAGGAAGTCTTTCTGTTGCAGCAGAAGTTTTCGAGATTAGTCCGTCATTGTATGTAGTTGAATTGAGAAAATCGTTTGGAGATTCTTCAGATTATCGACAGTTGTGTAAGAGACTGTCGAACGATCTAGGTGCTGCAGGAAGCCAGGAGGAGTTAAGTCAGCCAATGTTGCGTACAGAGACAGTATCGAATGTTTACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_26089.p1 GENE.R_Transcript_26089~~R_Transcript_26089.p1 ORF type:complete len:457 (+),score=69.24,Pkinase|PF00069.21|1.4e-71,Pkinase|PF00069.21|2e+03,Pkinase_Tyr|PF07714.13|5.1e-39,Pkinase_Tyr|PF07714.13|4.9e+02,NAF|PF03822.10|8.6e-16,Kinase-like|PF14531.2|63,Kinase-like|PF14531.2|3.3e-06 R_Transcript_26089:289-1659(+)
MVREVEEERGGKGMRLGKYELGRILGEGNFGKVKFARNIETGQPFAVKILEKKKILNLKITDQIKREIATLKLLKHPNVVRLYEVLASKTKIYMVLEYVNGGELFDKIASRGKLPEKIGRRLFQQLIDGVSYCHDKGVFHRDLKLENILIDGKGNIKVSDFGLSALPQHFGSDGLLHTTCGSPNYVAPEILANRGYNGATADVWSCGVILYVILTGYLPFDDRNLAVLYQKITRGDVQIPKWLSTGAQRMIKRILDPNPVTRITIAEIKSDAWFSQGYAPANTDDDEDNVYIDEEALSIKEVMQKSDGEKIPGFPTVINAFQLIGMSSYLDLSGFFEPEDVSERKIRFTSNLSHKELLERIENIVTGMGYCVQKKNGRLKVVQKQRGHRSPGSLSVAAEVFEISPSLYVVELRKSFGDSSDYRQLCKRLSNDLGAAGSQEELSQPMLRTETVSNVY*

Click here to download the sequence:
Link to NCBI Protein BLAST