Transcript Information: R_Transcript_261047.p1


Annotated TAIR IDAT5G12260.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: glycosyltransferase family protein 2 (TAIR:AT5G60700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3966417-3968684 | Forward length=624
E-Value2E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0430263402696
Replicate 20.47991543808681
Replicate 30.26179128681317
Condition 2: 8 Hour
Replicate 10.27983845653994
Replicate 21.1499882089753
Replicate 30.93351140333419
Condition 3: 24 Hour
Replicate 10.65593734936297
Replicate 20.88221035562309
Replicate 30.75043558926505


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_261047.p1 GENE.R_Transcript_261047~~R_Transcript_261047.p1 ORF type:5prime_partial len:175 (+),score=34.13 R_Transcript_261047:2-526(+)
GCTATCTCCTTCTTCTTCTCCTCTTTCTCACTGAAAAATGTGGTTTGTGTTCCGTCTTTCTTCCACAATGGCATCACCAAAGAAACACTACCTTCCAATACTCCTCCTTTCCCTCTTCACTCTCTTCATTTTCTCTCAATTCTTCATCTCCCCTCCTTCGTCTTCTCTCTCCAATTCAACCCACTTCCTCTCTTCCCCTCTTCTCAAACCCCTCAGAAATTCACTTTCACCATCAAAGTTTTAGCCTTTGATCGCTTATCTTCCCTATCTCGTTGCCTAAACTCTCTTTCCTCTGCCCATTATGGAACTGACACTGTCAATCTCCACATCTTCGTTGACCACTTTGTTAACCCATCTGGTGGGTCTCCTGGTTTGGGCTCAAAGCTCGAGAATTCCCACAAAATATTGGATTTTGTTGATGGTTTTAAGTGGATTTTTGGAGAAAAGTTGGTTCATTATAGGACACTCAATGTGGGCTTGCAGGCCCAGTGGTTGGAAGCTTGGTGGCCTAGCACTGATGGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_261047.p1 GENE.R_Transcript_261047~~R_Transcript_261047.p1 ORF type:5prime_partial len:175 (+),score=34.13 R_Transcript_261047:2-526(+)
AISFFFSSFSLKNVVCVPSFFHNGITKETLPSNTPPFPLHSLHFLSILHLPSFVFSLQFNPLPLFPSSQTPQKFTFTIKVLAFDRLSSLSRCLNSLSSAHYGTDTVNLHIFVDHFVNPSGGSPGLGSKLENSHKILDFVDGFKWIFGEKLVHYRTLNVGLQAQWLEAWWPSTDG*

Click here to download the sequence:
Link to NCBI Protein BLAST