Transcript Information: R_Transcript_262149.p1


Annotated TAIR IDAT1G15390.1
Annotated Gene Namepeptide deformylase 1A
Annotated Gene Symbol(s)PDF1A, ATDEF1
Annotation TypeOrtholog
Chromosome Positionchr1:5294653-5295625 | Forward length=269
E-Value5.7E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3801779545776
Replicate 22.7217426465572
Replicate 31.2725965331196
Condition 2: 8 Hour
Replicate 11.9649150883592
Replicate 22.070452022332
Replicate 32.4650335410402
Condition 3: 24 Hour
Replicate 12.9760120480357
Replicate 21.4975793073849
Replicate 31.6213114582887


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_262149.p1 GENE.R_Transcript_262149~~R_Transcript_262149.p1 ORF type:complete len:162 (+),score=22.51,Pep_deformylase|PF01327.17|2.6e-26 R_Transcript_262149:143-628(+)
ATGGACCGAAAGAGGAGATCAAAGCACAGGACAGACGCCCCTTTGATCTTCTGGTATGATTGTGATTCAAGACATTTTAAGCATATGAATCAATTGTTCCTTTTGGTTTCTATTCCCTTGCGTTCTCCAGGTGCAAAAATTCCATTTATATATTGTGACAAGCTTCTACATATGAGGCAGGTCATCGTGAATCCAAAACTCAAAAAGAAGAGCAACAGAACGCTATTCTTTGAAGGCTGCCTGAGTGTTGATGGTTACAGAGCAGTTGTGGAGCGAAACCTTGATGTTCAGGTCACAGGACTGGACCGATATGGACAGCCTATTACAGTGGATGCTTCAGGATGGCAGGCACGCATTCTCCAGCATGAGTGCGACCATTTGGAGGGAACCCTCTATGTTGACAAGATGCTTCCTAAGACATTTCGAACTGTGGAAAATAGGGATTTGCCTCTTGCAGCAGGGTGCCCAAAGCTTGGGCCCCGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_262149.p1 GENE.R_Transcript_262149~~R_Transcript_262149.p1 ORF type:complete len:162 (+),score=22.51,Pep_deformylase|PF01327.17|2.6e-26 R_Transcript_262149:143-628(+)
MDRKRRSKHRTDAPLIFWYDCDSRHFKHMNQLFLLVSIPLRSPGAKIPFIYCDKLLHMRQVIVNPKLKKKSNRTLFFEGCLSVDGYRAVVERNLDVQVTGLDRYGQPITVDASGWQARILQHECDHLEGTLYVDKMLPKTFRTVENRDLPLAAGCPKLGPR*

Click here to download the sequence:
Link to NCBI Protein BLAST