Transcript Information: R_Transcript_262151.p1


Annotated TAIR IDAT1G15390.1
Annotated Gene Namepeptide deformylase 1A
Annotated Gene Symbol(s)PDF1A, ATDEF1
Annotation TypeOrtholog
Chromosome Positionchr1:5294653-5295625 | Forward length=269
E-Value1.5E-94
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.0114542066439
Replicate 23.3946114445512
Replicate 35.8981420157758
Condition 2: 8 Hour
Replicate 13.958792536381
Replicate 23.7491298895401
Replicate 35.1085371207077
Condition 3: 24 Hour
Replicate 17.56095447619
Replicate 27.1316405993483
Replicate 37.6017177954494


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_262151.p1 GENE.R_Transcript_262151~~R_Transcript_262151.p1 ORF type:5prime_partial len:167 (+),score=33.95,Pep_deformylase|PF01327.17|3.7e-42 R_Transcript_262151:1-501(+)
ATCGGGTCAGAGAGGATTCAAAAGATAATTGATGATATGGTTAAGGTTATGAGGAAGCCTCCTGGGGTTGGCCTTGCTGCTCCTCAAATTGGTATCCCTTTAAGGATTATTGTATTGGAGGATACTAAAGAGTACATCAGTTATGGACCGAAAGAGGAGATCAAAGCACAGGACAGACGCCCCTTTGATCTTCTGGTCATCGTGAATCCAAAACTCAAAAAGAAGAGCAACAGAACGCTATTCTTTGAAGGCTGCCTGAGTGTTGATGGTTACAGAGCAGTTGTGGAGCGAAACCTTGATGTTCAGGTCACAGGACTGGACCGATATGGACAGCCTATTACAGTGGATGCTTCAGGATGGCAGGCACGCATTCTCCAGCATGAGTGCGACCATTTGGAGGGAACCCTCTATGTTGACAAGATGCTTCCTAAGACATTTCGAACTGTGGAAAATAGGGATTTGCCTCTTGCAGCAGGGTGCCCAAAGCTTGGGCCCCGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_262151.p1 GENE.R_Transcript_262151~~R_Transcript_262151.p1 ORF type:5prime_partial len:167 (+),score=33.95,Pep_deformylase|PF01327.17|3.7e-42 R_Transcript_262151:1-501(+)
IGSERIQKIIDDMVKVMRKPPGVGLAAPQIGIPLRIIVLEDTKEYISYGPKEEIKAQDRRPFDLLVIVNPKLKKKSNRTLFFEGCLSVDGYRAVVERNLDVQVTGLDRYGQPITVDASGWQARILQHECDHLEGTLYVDKMLPKTFRTVENRDLPLAAGCPKLGPR*

Click here to download the sequence:
Link to NCBI Protein BLAST