Transcript Information: R_Transcript_262154.p1


Annotated TAIR IDAT1G15390.1
Annotated Gene Namepeptide deformylase 1A
Annotated Gene Symbol(s)PDF1A, ATDEF1
Annotation TypeOrtholog
Chromosome Positionchr1:5294653-5295625 | Forward length=269
E-Value8E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.6753685777257
Replicate 24.1992600832596
Replicate 35.1049300928568
Condition 2: 8 Hour
Replicate 14.3374960763691
Replicate 24.727729303565
Replicate 34.978727484449
Condition 3: 24 Hour
Replicate 16.4281860237572
Replicate 27.3097429465913
Replicate 37.129138098018


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_262154.p1 GENE.R_Transcript_262154~~R_Transcript_262154.p1 ORF type:3prime_partial len:175 (+),score=32.82,Pep_deformylase|PF01327.17|3.2e-16 R_Transcript_262154:122-643(+)
ATGGAGTCTTTACCTCGCCTATCTCAGCACGTCCTTTCACTCTCATCCCCAAAACCCAACTTCAAATTCTTCCTAACCCTAGTTCTCCATCTCCAAGCTCCCCAACAACCCAATTCAAAACCCGGACTCATCTGCCCAAACCCACTTAAAACCTCCCATGTTCTCCATCCTACAATAAGAAACTTCAGGTCCTCTGCCTCACCCAAATGGACTACCAAAGCAGGATGGTTACTGGGTCTTGGAGAAAAGAAACAACAATTGCCTGATTTGGTGAAAGCAGGTGACCCGATTCTTCATGAACCAGCTCAAGTAGTTGACCCGAAAGAAATCGGGTCAGAGAGGATTCAAAAGATAATTGATGATATGGTTAAGGTTATGAGGAAGCCTCCTGGGGTTGGCCTTGCTGCTCCTCAAATTGGTATCCCTTTAAGGATTATTGTATTGGAGGATACTAAAGAGTACATCAGTTATGGACCGAAAGAGGAGATCAAAGCACAGGACAGACGCCCCTTTGATCTTCTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_262154.p1 GENE.R_Transcript_262154~~R_Transcript_262154.p1 ORF type:3prime_partial len:175 (+),score=32.82,Pep_deformylase|PF01327.17|3.2e-16 R_Transcript_262154:122-643(+)
MESLPRLSQHVLSLSSPKPNFKFFLTLVLHLQAPQQPNSKPGLICPNPLKTSHVLHPTIRNFRSSASPKWTTKAGWLLGLGEKKQQLPDLVKAGDPILHEPAQVVDPKEIGSERIQKIIDDMVKVMRKPPGVGLAAPQIGIPLRIIVLEDTKEYISYGPKEEIKAQDRRPFDLL

Click here to download the sequence:
Link to NCBI Protein BLAST