Transcript Information: R_Transcript_262182.p1


Annotated TAIR IDAT3G01680.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:252033-255246 | Forward length=740
E-Value1E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.57716872584091
Replicate 20.58092530796082
Replicate 30.54324278884156
Condition 2: 8 Hour
Replicate 10.19356414978059
Replicate 20
Replicate 30.28698198609308
Condition 3: 24 Hour
Replicate 10.090742321058119
Replicate 20.26152480897918
Replicate 30.43256333373315


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_262182.p1 GENE.R_Transcript_262182~~R_Transcript_262182.p1 ORF type:5prime_partial len:253 (+),score=19.76,SEO_C|PF14577.2|7.7e-80 R_Transcript_262182:2-760(+)
GCAAGGGAAGAGTCATTGTGGGAGGAGAGCTGGAGGCTTGAGTTACTAGTTGATGCCATTGATCCAACAATTTCAGATTGGATTGGAGACGGGAAGTACATATTCATGTACGGAGGGGACGACATAGAATGGATAAAGAAGTTTACAACAGCAGCACGGGCCGTGGCACATGCTCTAAGAGTCCCACTAGAGATGGTATACGTAGGAAGGAGTCATAACAAGGAGGTGGTTCGCAAAGTTCGCCAAACAATATTAATTGACAAGCTAAGCTCATGTTGGCAAGACCCAACAATGGTGTGGTTCTTTTGGACAAGGCTAGAAAGCATGATTTACTCCAAATTCCAAATGGCTATAATCGATCATCGAACTGACTTTATCTTCCAAGAACTACAGAGGCTCCATAGCTACGATAAGGGACATGTAGGGTGGGCGGTGCTAGCCAAAGGCTCGACCATTGTGGTCAATGGGCACGGACCCAACATAGTGAGTGCACTAATTGAACAAGACTTTTGGAAGCCACAAGCATTAAGGGAGGGTTTCGACGTAGCGTTCAAGGCTCACTATATGGAATTACATAGAAAAGAGTATCCTTGTCATCGAGTTCAATTCCCGTTGGGTATTAAAGTTCCTGATGTTATGGTTTGTCCTGACTGTCATCGTATTATGCAGAGGTACAACTCTTTCATATGTCGCCATGAGGATGTCTTGGGTGTAGTTGGGAATAATAATGTTCCTCCCCCTCTTGTGTACGAGGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_262182.p1 GENE.R_Transcript_262182~~R_Transcript_262182.p1 ORF type:5prime_partial len:253 (+),score=19.76,SEO_C|PF14577.2|7.7e-80 R_Transcript_262182:2-760(+)
AREESLWEESWRLELLVDAIDPTISDWIGDGKYIFMYGGDDIEWIKKFTTAARAVAHALRVPLEMVYVGRSHNKEVVRKVRQTILIDKLSSCWQDPTMVWFFWTRLESMIYSKFQMAIIDHRTDFIFQELQRLHSYDKGHVGWAVLAKGSTIVVNGHGPNIVSALIEQDFWKPQALREGFDVAFKAHYMELHRKEYPCHRVQFPLGIKVPDVMVCPDCHRIMQRYNSFICRHEDVLGVVGNNNVPPPLVYEG*

Click here to download the sequence:
Link to NCBI Protein BLAST