Transcript Information: R_Transcript_26296.p1


Annotated TAIR IDAT2G46020.2
Annotated Gene Nametranscription regulatory protein SNF2, putative
Annotated Gene Symbol(s)CHR2, ATBRM, BRM, CHA2
Annotation TypeOrtholog
Chromosome Positionchr2:18923304-18931769 | Forward length=2193
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.150647559049
Replicate 211.416021264599
Replicate 314.760033560362
Condition 2: 8 Hour
Replicate 117.62848473661
Replicate 222.584897961635
Replicate 323.929377388898
Condition 3: 24 Hour
Replicate 120.961021626387
Replicate 215.436672547731
Replicate 320.203268397241


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_26296.p1 GENE.R_Transcript_26296~~R_Transcript_26296.p1 ORF type:complete len:2196 (+),score=553.64,SNF2_N|PF00176.19|1.1e-67,Helicase_C|PF00271.27|1.5e-17,Helicase_C|PF00271.27|4.9e+03,QLQ|PF08880.7|1.5e-09,ResIII|PF04851.11|1.4e-06 R_Transcript_26296:335-6922(+)
ATGGATAAGGATAATCCTTCTCAGTCATTACAGCATCCACTTCTGAGAAAACCTGAAGGAAATGAAACGATTATAGCATTTCAAGGAGGTGGTGGACCGGGTGGTCTTCAGGGTGTCATGGGAGGGGGGAATTTTGTTGGGTCTCCAAACTCGTTGCAGTTTTCACAGTCGAGGAAAATGCCTGATGTTTCCCAGCAGCAGCAGCACGGCCCCCCTCATATGCACGAAGAAGGTCAAAGTAAAAGCCATGTTCATGAGCAACAAGTTTATAATCCTGTCCATCAAGCTTATTTGCAATACCAACTCCAGCAAAAGTCTGCCATGGGGTTGCAGCATCAGGGTCAGGGGCAACCCAAATTGGGAATGTTGGGGTCTTCATCGGGAAATAATATGAAAATGCAAGACCTTGTTTCAATGCAGGCAAACAACCAGGCCCAGGCAGCATCGAAGAAACCATCTGAGCCTTTTGGTCGTGTTGAGAGACAGATGGAGCAAGGCCAACAAGGTGGTTCTGATCAGAGGAACGAATCAAAGCCTCCTATGATGCAAACAACAATGGGACATCCATTGGGTGCAACTATGACGAGGCCGATGCAACATCCTCAGGTTCAGCCAGGGATGCAAAGCATGGCAAATAACCAGATGGCAGTGGCTGCCCAACTGCAGGCGTGGGCACTCGAACGAAATATTGATTTATCTCAACCTCAAAATGCCAACTTGGTGGCTCAACTTATGCCTTTCGTGCAATCTAGGATGATGGCACAGCAAAAGGCAAATGAAGGCCAGTCATCTCCCGTCCCTTTGCAAAGACAGCAGGTTGCTTCTCCACCAGTTGCTGCTGAAAACTCACCTCGTGCTAATTCGTCAAGTGAAGTTTCTGGGCAGTCAAGCTCTTCCAGAGCTAGGCAAACAGCTCCATCAGGACCTTTTGGCTCAGCTTCTAATGCTGGGATAGTTCACAATTCTAACAATTTGCCAGCACAGTTCTCTGGTCACGGTAGAGATAACCAGGCACCTCAAATGCAGCCTGTGATGGGGGGAAGTGGAATGCCTTCTGTTCAGGCAGCCCGACCTTCAGTGAACTTGAAACAAGGTTTGGAAAATACACTGCATATGAAAAATGCAGCAGCTACCCAAGACACATTGCAAATGCAGTATCTCAGGCAGATGAATCGGTCTTCTCCTCAACCTGCTGGAACATCTAGTGATGGAGGCTCAGGAAATCTTCCGCCATCCCAATCTCAGCTACCATCCCACCCTCAGCAACCCTCCCAGTCTCAGCAACCCTCCCAGAGCTCACAACTGCAGTCTGGGTTCACAAAGCAACAACTGCATGTTCTCAAAGCGCAAATACTTGCCTTTAGACGCCTGAAGAAAGGGGAAAGCACTCTTCCACAAGAACTGTTACGTGCGATTGTTCCACCACCTCTTGAGACACAAGGGCAGCAACCCCCAGTTCCTGCTGGTTCTACTAATCAGGATAATTCTTCCACCAGGATTGTTGATGTAAGTCCAAAGCAATTAGAGTCTAATGAGAAAGGTCCACAGGCTCCATCCCCTGCAGCCTTGAAAAATGTATCCAGAGAGGAAGCTTCACTTGATGAAAAGGCAACTAGCTTGACAACAAATGTGCCTGGTGCAACATCTGTCACCAGAGAGGCTTCTTCAAATATATCTTCTGGAAAGGAAGACCAGCAATCTACCCCAATTGTTGTTAAGCCTGAACAAGATGTTGAACACAGTGTACAGAAAACTCCTATTAGAAATGACTTGAGTATGGATAGGGGAAAGGCTGTCGCAGCACCAGGTTCTGCAGCTGAAACTAAGAAGCCCATCCAAGCAGGTCCACCATCCCAGGCAAAGGATATCAGTTCCACCAGAAAGTATCATGGTCCATTGTTTGATTTCCCATGTTTTACTAGAAAACATGACTCTCTTGGTTCTGCAGTGGTAGCAAACAACAATTTATCTTTGGCTTATGACATCAAAGATCTTCTAATTGAGGAAGGCATCGAGATGATTAACAATAAGAGGGAACAGAACTTGAAGAAGATTGGTGGCTTGTTAGCTGTTAACTTAGAGAGGAAAAGGATCAGGCCAGATCTTGTTGTGCGGCTGCAAATTGAAGAAAAAAAACTTAAGCTGTTAGACATTCAGGCACGTCTGAGGGATCAAGTAGATCTAGAGCAGCAGGAAATAATGGCTATGACTGACAGGGAATATAGGAAATTTGTCCGGATATGCGAGCGGCAACGCTTGGAACTTTTGAGGCAAGTTCAAGCTTCTCAGAAAGCTATGAGAGAAAAGCAGCTTAAATCAATATTTCTGTGGCGAAAGAAGCTCCTTGAGACACATTGGGCTATCCGTGATGCAAGGACTGCCCGTAACAGAGGTGTTGCAAAATATCACGAGAGGATGCTTAGGGAGTTTTCAAAGAGAAAGGATGATGATAGGAATAAGAGAATGGAGGCCTTGAAAAATAATGATGTTGAAAGATACAGGGAAATGCTTCTGGAGCAGCAGACGAGCATTCCAGGTGATGCTGCTGAGAGGTATGCTGTTCTCTCAACATTTTTGACTCAGACGGAAGAATACCTTCACAAACTGGGGAGCAAGATAACGGCTGCCAAAAGTCAGCAAGAGGTTCAGGAAGCAGCTGCAGCCGCAGCTGCCGCTGCTCGAGCTCAGGGTCTATCAGAAGAAGAAGTTAGAGCTGCAGCTGCTTGTGCTGGCGAGGAAGTAACGATAAGAAATCAGTTCTCTGAAATGAATGCGCCGAAGGATAGTTCATCAGTCAACAAGTATTACAGTCTTGCACATGCTATAAATGAGAGAGTTGTGAGACAACCTTCAATGTTAAGGGCTGGAACACTGCGAGATTATCAGCTTGTTGGGTTACAATGGATGCTTTCTTTGTATAACAACAAGCTGAATGGGATTTTGGCAGATGAAATGGGTCTTGGGAAAACTGTACAGGTGATGGCATTGATTGCTTACTTGATGGAGTTTAAAGGGAACTATGGCCCTCATCTAATTATAGTCCCTAATGCTGTTCTAGTGAATTGGAAGAGTGAATTACATACTTGGCTGCCAGGTGTGTCGTGCATTTACTATGTTGGTGGAAAGGATCAAAGGTCCAAATTATTTTCTCAAGAAGTTCTTGCTATGAAATTTAATGTTCTTGTCACAACCTATGAGTTTATTATGTACGACCGTTCAAAACTTTCTAAAGTTGATTGGAAATATATCATAATTGATGAAGCACAAAGAATGAAGGATAGAGAATCAGTTCTAGCTCGTGATTTGGACAGATATCGCTGTCAAAGGCGTCTTCTACTTACAGGGACACCTTTACAGAATGATTTGAAGGAGCTATGGTCTCTGCTTAATTTACTTCTTCCGGAGGTATTTGACAATCGCAAAGCATTCCATGATTGGTTCTCACAGCCCTTTCAAAGGGAAGGTCCTACACATAATGCAGAAGATGATTGGCTCGAAACTGAAAAAAAGGTTATTATTATCCATAGGCTCCATCAGATTTTGGAGCCATTTATGCTCAGACGGCGTGTTGAAGATGTGGAAGGCTCTCTCCCTCCCAAGGTGTCTTCTGTTCTGAAATGTAAGATGTCTGCTATCCAAGGCGCTATATATGATTGGGTTAAAGCTACTGGCACACTTCGTGTGGACCCAGAAGATGAGAAGATTAGGATTCAAAAGAATCCATATTACCAGGCTAGGACTTATAAAACTTTAAATAATAGGTGTATGGAGCTACGAAAAGTTTGCAATCACCCTTTGCTGAATTATCCATATTTTAGTGATTTGTCAAAGGATTTCCTGGTAAAATCTTGTGGGAAGTTATGGATCTTGGATAGAATCCTCATAAAACTTCAAAAATCAGGGCATCGAGTGCTTCTCTTTAGTACTATGACCAAGCTACTTGATATTCTGGAGGAGTATTTGCAATGGAGGCGGCTTGTTTATCGGCGAATTGATGGAACAACTAGCTTGGAAGACCGTGAATCAGCCATCGTGGACTTCAATGACCCAGAGTCAGAGTGCTTTATCTTTCTGCTGAGTATTCGTGCTGCTGGACGTGGTTTAAATCTTCAAACTGCTGACACTGTCATTATATATGACCCTGATCCCAACCCCAAGAATGAGGAACAGGCAGTTGCCAGAGCGCATCGCATAGGGCAAACCCGGGAAGTAAAAGTCATTTACATGGAAGCTGTGGTTGACAAAATAGCCAGTCATCAAAAGGAGGATGATTTCAGAATTGGAGGTACAGTAGACTTAGAGGATGATCTAGCAGGAAAGGATCGGTATATTGGCTCAATTGAGAGCCTTATACGAAATAACATCCAACAGTATAAAATTGACATGGCTGATGAAGTAATCAATGCTGGGCGTTTTGATCAGAGGACAACACATGAGGAGAGACGGATGACTTTAGAAACATTACTGCATGACGAGGAGAGATATCAAGAAACAGTTCATGATGTCCCCTCTCTGCAGGAGGTCAATCGAATGATTGCACGGAGTGAAGAAGAAGTTGCACTCTTTGATCAGATGGATGAAGACTTTGATTGGGCTGAGGAGATGACCAGGTATGATGAAGTACCGGAATGGCTTCGTGCCAGTACAAAGGAAGTTAATGCTGCCATTGCTTCTTTGTCCAAAAAGCCATCGAAGGACATCTTTAATAGCAATTTGGTAGTGGAGGGTGAAACTGATAGGAAGAGGGGTCGGCATAAGGGGAAGAAATTTCCTGTGTACACTGAGTTGGATGATGATAATGGAGAATCTTCTGATGCTAGTTCTGAAGACAGAAATGGATATTCAGCCCATGATGAGGAAGGTGAAATTGGAGAATTTGAAGACGAAGAAGAGGATGGAGCTGCTGCAGCCAATAAGGATAAGTTAGAAGAGGAGGCTCCTCTTTGTAATGGTGGGTATGATTACCCTCGAACTAGTGGAAGCACCAGAACTGGCCATATGATTGAAGAACCTGGATCCCCTGGTTCATCCTCTAATAGTCGCAGAATGGCACGAACAGTCTCACCGTCTGTGTCTTCCCAGAAGTTCACTACGCTGTCAGCTATAGATGCTAGGCCAAGTTCTGGCTCAAAAAGACTGTCTGATGAGCTAGAGGAAGGGGAAATTGCTGTATCTGGAGATTCACATCTGGATGTTCAGCAATCAGGAAGTTGGAATCATGAGCGTGAAGAAGGTGAAGATGAACAGGTGGTGCAACCCAGAATCAAACGGAAGCGAAGTATAAGACTTCGACCACGGCACACCATGGAAAGGTCCGAAGAAAGGTACAGCAATGAGAAGCCAACTCTTCAACGTGGAGACTCATTTCAATCTCAATTTATTACAGATCAGAAATTTGGAACTCAACTAAGGATTGAGCCTGAGTTCAAAAAGTTGGGGGATTCTGCTGCTATTAAGCAAGATCGAGGTGACTTGTCTTCAAAAACTCGCCGCAGCTTGCCTTCTAGAAGGACTGGAAGTACATCAAAGCTGCATGGGTCTGCAAAAGCTGGTAGACTGAATAGCCTGTCCACTCCCAGTGATGATGCTGTTGAGAACTCTCGAGAGAGTTGGGATGGTAAAGATATGAACACATCTGTGAATCCCAACTATGGGGCGAAGATGTCTGATGCTGTCCTTCGGAAGTGCAAAAGTGTGATTGGCAAAGTCCAACGGAGGATAGACAAGGAAGGCCCTCAAATTGTACCTCTGCTGACTGATCTGTGGAGTAGACCTGATAGCTCTGGCTACACAAATGGACCAGCAAACAAACTTTTGGATTTGCGTAAGATTGACAATCGAGTTGACAGACTTCACTATAATGGGATAATGGAATTTATTAATGATGTGCGATCAATGCTGAAAAATGCTGTGCAGTATTATGGTTTCTCACATGAGGTTAGATGTGAAGCAAGGAAGGTGCATGATCTGTTTTTTGATATTTTGGCTATGTCTTTCCCCGACATTGATTTCCAGGACGCCAAAAATGCAATGTCCTTTTCTGGCCCAACAGCGTCAACTTCATCTTCTGCTTTGAGATCAGCAGCCGGATCCCAAAGTAGAAAGCATAAACTGATGAATGATGTAGAGCGGGAGATGAGTCCATCACCAAGGCAATCAATGCGTGGGCCAGCTACTATCAATGAAGAAATGAGGATGACAAGATCCCATTTGCCCGTAAAGGAATCAAGACTTGGCAGCAATGCCAGCAGCAGCCGGGACCAAGGGCAGCAGCATGATGAGTCTCCCATGCTGACCCATCCTGGAGATTTGGTAGTTTGCAAGAAAAAGAGGAAAGACAGGGAGAAGCCTACTGTGAATACTAGGTCTGGGTCGTCGGGGCCTGTTTCACCCTCTAGCATGGGACGTAGTATTAGGAGCCCTGGTTCAGCATCTACTCCAAGGGAAACCAGATCATCCCAACAGCAAGTTTGGTCGAATCAGTCACAACAGGTTAATGGAAGCAGTGGTGGAGGAACCGTTGGTTGGGCCAACCCTGTAAAGAGATTGAGGACAGATGCTGGGAGGCGACGGCCAAGCATTTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_26296.p1 GENE.R_Transcript_26296~~R_Transcript_26296.p1 ORF type:complete len:2196 (+),score=553.64,SNF2_N|PF00176.19|1.1e-67,Helicase_C|PF00271.27|1.5e-17,Helicase_C|PF00271.27|4.9e+03,QLQ|PF08880.7|1.5e-09,ResIII|PF04851.11|1.4e-06 R_Transcript_26296:335-6922(+)
MDKDNPSQSLQHPLLRKPEGNETIIAFQGGGGPGGLQGVMGGGNFVGSPNSLQFSQSRKMPDVSQQQQHGPPHMHEEGQSKSHVHEQQVYNPVHQAYLQYQLQQKSAMGLQHQGQGQPKLGMLGSSSGNNMKMQDLVSMQANNQAQAASKKPSEPFGRVERQMEQGQQGGSDQRNESKPPMMQTTMGHPLGATMTRPMQHPQVQPGMQSMANNQMAVAAQLQAWALERNIDLSQPQNANLVAQLMPFVQSRMMAQQKANEGQSSPVPLQRQQVASPPVAAENSPRANSSSEVSGQSSSSRARQTAPSGPFGSASNAGIVHNSNNLPAQFSGHGRDNQAPQMQPVMGGSGMPSVQAARPSVNLKQGLENTLHMKNAAATQDTLQMQYLRQMNRSSPQPAGTSSDGGSGNLPPSQSQLPSHPQQPSQSQQPSQSSQLQSGFTKQQLHVLKAQILAFRRLKKGESTLPQELLRAIVPPPLETQGQQPPVPAGSTNQDNSSTRIVDVSPKQLESNEKGPQAPSPAALKNVSREEASLDEKATSLTTNVPGATSVTREASSNISSGKEDQQSTPIVVKPEQDVEHSVQKTPIRNDLSMDRGKAVAAPGSAAETKKPIQAGPPSQAKDISSTRKYHGPLFDFPCFTRKHDSLGSAVVANNNLSLAYDIKDLLIEEGIEMINNKREQNLKKIGGLLAVNLERKRIRPDLVVRLQIEEKKLKLLDIQARLRDQVDLEQQEIMAMTDREYRKFVRICERQRLELLRQVQASQKAMREKQLKSIFLWRKKLLETHWAIRDARTARNRGVAKYHERMLREFSKRKDDDRNKRMEALKNNDVERYREMLLEQQTSIPGDAAERYAVLSTFLTQTEEYLHKLGSKITAAKSQQEVQEAAAAAAAAARAQGLSEEEVRAAAACAGEEVTIRNQFSEMNAPKDSSSVNKYYSLAHAINERVVRQPSMLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTWLPGVSCIYYVGGKDQRSKLFSQEVLAMKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQREGPTHNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSSVLKCKMSAIQGAIYDWVKATGTLRVDPEDEKIRIQKNPYYQARTYKTLNNRCMELRKVCNHPLLNYPYFSDLSKDFLVKSCGKLWILDRILIKLQKSGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPESECFIFLLSIRAAGRGLNLQTADTVIIYDPDPNPKNEEQAVARAHRIGQTREVKVIYMEAVVDKIASHQKEDDFRIGGTVDLEDDLAGKDRYIGSIESLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLQEVNRMIARSEEEVALFDQMDEDFDWAEEMTRYDEVPEWLRASTKEVNAAIASLSKKPSKDIFNSNLVVEGETDRKRGRHKGKKFPVYTELDDDNGESSDASSEDRNGYSAHDEEGEIGEFEDEEEDGAAAANKDKLEEEAPLCNGGYDYPRTSGSTRTGHMIEEPGSPGSSSNSRRMARTVSPSVSSQKFTTLSAIDARPSSGSKRLSDELEEGEIAVSGDSHLDVQQSGSWNHEREEGEDEQVVQPRIKRKRSIRLRPRHTMERSEERYSNEKPTLQRGDSFQSQFITDQKFGTQLRIEPEFKKLGDSAAIKQDRGDLSSKTRRSLPSRRTGSTSKLHGSAKAGRLNSLSTPSDDAVENSRESWDGKDMNTSVNPNYGAKMSDAVLRKCKSVIGKVQRRIDKEGPQIVPLLTDLWSRPDSSGYTNGPANKLLDLRKIDNRVDRLHYNGIMEFINDVRSMLKNAVQYYGFSHEVRCEARKVHDLFFDILAMSFPDIDFQDAKNAMSFSGPTASTSSSALRSAAGSQSRKHKLMNDVEREMSPSPRQSMRGPATINEEMRMTRSHLPVKESRLGSNASSSRDQGQQHDESPMLTHPGDLVVCKKKRKDREKPTVNTRSGSSGPVSPSSMGRSIRSPGSASTPRETRSSQQQVWSNQSQQVNGSSGGGTVGWANPVKRLRTDAGRRRPSIL*

Click here to download the sequence:
Link to NCBI Protein BLAST