Transcript Information: R_Transcript_262988.p1


Annotated TAIR IDAT3G07880.1
Annotated Gene NameImmunoglobulin E-set superfamily protein
Annotated Gene Symbol(s)SCN1
Annotation TypeHomolog
Chromosome Positionchr3:2514175-2515544 | Forward length=240
E-Value9E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.71932851053079
Replicate 20.82744041049451
Replicate 31.1284107190223
Condition 2: 8 Hour
Replicate 10.361860073112
Replicate 20.5507606364824
Replicate 30
Condition 3: 24 Hour
Replicate 10.56546323220946
Replicate 20
Replicate 30.86256964283339


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_262988.p1 GENE.R_Transcript_262988~~R_Transcript_262988.p1 ORF type:complete len:203 (+),score=36.26,Rho_GDI|PF02115.13|7e-60 R_Transcript_262988:91-609(+)
ATGGATGCTGATGATGTCAGTTTACAAAAATATAAAGCAGCTTTGTTGGGTTCTGCTTTAGAGGACGGTTGCTCTCCTGCTGATGACCCACGACGAGTCGTCATCAAATCTATGTCTTTGATTTTTGAAAACAGACCAGGAGGCGATATTGTTTACAAATTCGAAAGCCAAGCTGATGTAGATGCCATGAAAAATAAACCTTTTGTTCTCAGAGAAGGATGTGCATACAAAATTAAGGTTGAATTTAAAGTTCAACACGAAATTGTATCTGGTCTTAAATATGTCAATCAAGTTTACCGATCTGGTATCCGAGCTGTTAAAGAAGAAGAAATGCTTGGAAGTTTTGCTCCTCAAAAGGCCTCTCACTCTATCACTTTTCCCAAACAAGGTTGGGAAGAAGCTCCCAAAGGTGCCCTTGCCCGTGGAAAATACACCGCTAAGAGCAAATTTGTGGATGATGACAAACAAACTCATTTACGATATGAATACTCCTTCCAAATCAAAAAGGATTGGGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_262988.p1 GENE.R_Transcript_262988~~R_Transcript_262988.p1 ORF type:complete len:203 (+),score=36.26,Rho_GDI|PF02115.13|7e-60 R_Transcript_262988:91-609(+)
MDADDVSLQKYKAALLGSALEDGCSPADDPRRVVIKSMSLIFENRPGGDIVYKFESQADVDAMKNKPFVLREGCAYKIKVEFKVQHEIVSGLKYVNQVYRSGIRAVKEEEMLGSFAPQKASHSITFPKQGWEEAPKGALARGKYTAKSKFVDDDKQTHLRYEYSFQIKKDWE*

Click here to download the sequence:
Link to NCBI Protein BLAST