Transcript Information: R_Transcript_263299.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value2E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.12008526943894
Replicate 20.13813355537038
Replicate 30
Condition 2: 8 Hour
Replicate 10.64436486703277
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.58040154975203
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_263299.p1 GENE.R_Transcript_263299~~R_Transcript_263299.p1 ORF type:5prime_partial len:152 (+),score=15.72,gag_pre-integrs|PF13976.2|7.8e-11,rve|PF00665.22|8.2e-08 R_Transcript_263299:3-458(+)
GACAACGTCAACATTCCAGAACATGATCCCAGTATATTATGGCATAGAAGGCTTAGTCACATAAGTGAAAAAGTCCTGAACTGTTTGCATAGGATGAATGTGCTCTCTTGTGTTAAGAGTGCAAAGTTGGAGAGATGTTCACATTGCATGATTGGTAAGCAAACCAGAGTCTCTTTCAAGACTCAACATCCCTCAAGAAAGCCAGTTTTGCTCGAGTTAGTTCATACTGATGTTCATGGCTTGAAGGTAAGATCTCGTTGTGGTGCACTATATTTTGTTATCTTCATAGATGATTGTTCTAGAAAACTTTGGGTTTATGCTTTGAAATCCAAAGATGAGGTACTTGGTGTCTTCAAACAATCTCATGCTATGCTTGAAAGACAGTCTGGGAGAAAACTCAAATGCTTGCGCTCTGACAATGGTTTAGTATTAAACTATGACTTTAGGTATACCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_263299.p1 GENE.R_Transcript_263299~~R_Transcript_263299.p1 ORF type:5prime_partial len:152 (+),score=15.72,gag_pre-integrs|PF13976.2|7.8e-11,rve|PF00665.22|8.2e-08 R_Transcript_263299:3-458(+)
DNVNIPEHDPSILWHRRLSHISEKVLNCLHRMNVLSCVKSAKLERCSHCMIGKQTRVSFKTQHPSRKPVLLELVHTDVHGLKVRSRCGALYFVIFIDDCSRKLWVYALKSKDEVLGVFKQSHAMLERQSGRKLKCLRSDNGLVLNYDFRYT*

Click here to download the sequence:
Link to NCBI Protein BLAST