Transcript Information: R_Transcript_263746.p1


Annotated TAIR IDAT5G24740.1
Annotated Gene NameProtein of unknown function (DUF1162)
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:8470073-8489703 | Reverse length=3464
E-Value7.8E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.73011843818875
Replicate 20.20996300416298
Replicate 30.68720212788457
Condition 2: 8 Hour
Replicate 10.97943459788981
Replicate 20.44721763682371
Replicate 30.18151610620387
Condition 3: 24 Hour
Replicate 10.22957807227704
Replicate 20.44110517781155
Replicate 30.43775409373795


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_263746.p1 GENE.R_Transcript_263746~~R_Transcript_263746.p1 ORF type:internal len:100 (-),score=16.56,VPS13_C|PF16909.1|8.5e-24 R_Transcript_263746:3-299(-)
AAACGGTTGCGGGTACGGAAACGGGGACGGGGAAACGGCAAAGTCTCAAAAATCAAGAAACGGAGGGGTATTATGGCTTTCGCTGATGTTGAGGGGGCACAAATTTCCCTCAGGGAATTGACAATAGCACATCACATGGCTAGTTGGGAGTCCATTCAACAAATTCTCTTCAAGCATTATTCTAGGCAATTTCTTCATGAGATGTACAAGGTGTTTGGTTCTGCTGGTGTAATTGGAAATCCTATGGGCTTTGCCAGAAGAGTTGGCCTTGGTGTTAAGGACTTCTTATCAGTTCCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_263746.p1 GENE.R_Transcript_263746~~R_Transcript_263746.p1 ORF type:internal len:100 (-),score=16.56,VPS13_C|PF16909.1|8.5e-24 R_Transcript_263746:3-299(-)
KRLRVRKRGRGNGKVSKIKKRRGIMAFADVEGAQISLRELTIAHHMASWESIQQILFKHYSRQFLHEMYKVFGSAGVIGNPMGFARRVGLGVKDFLSVP

Click here to download the sequence:
Link to NCBI Protein BLAST