Transcript Information: R_Transcript_264158.p1


Annotated TAIR IDAT4G28200.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), U3 small nucleolar RNA-associated protein 6 (InterPro:IPR013949); Has 492 Blast hits to 480 proteins in 206 species: Archae - 0; Bacteria - 2; Metazoa - 128; Fungi - 191; Plants - 60; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:13987808-13990422 | Reverse length=648
E-Value1E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.87966076890211
Replicate 20.50593494979031
Replicate 30.55196958063018
Condition 2: 8 Hour
Replicate 11.4750521052557
Replicate 21.3470410747702
Replicate 32.4056351424609
Condition 3: 24 Hour
Replicate 12.7660008708077
Replicate 20.79717803218954
Replicate 32.9007801392274


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_264158.p1 GENE.R_Transcript_264158~~R_Transcript_264158.p1 ORF type:internal len:83 (+),score=25.00 R_Transcript_264158:2-247(+)
GCTGAGGAGAAGCAGTGGCAAGATGAGAATAAAGAATTATTCATGTCCCTTGAAGAAAATAAAGAGGGTGGAAAGGGTGTGGAAGTTTCTAATGAAGATTCAAACAGGAAATTGGATATTTTTCGGGTTCATGGATTTAGCATTCTGCGTACTGTTTACAAAAATGCAGTTGATGCTCTGCCATATAATTTCAATCTTAGAAAGAGATTTCTTGAGATCGTTGAAGCTACTGATTTGACACATTCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_264158.p1 GENE.R_Transcript_264158~~R_Transcript_264158.p1 ORF type:internal len:83 (+),score=25.00 R_Transcript_264158:2-247(+)
AEEKQWQDENKELFMSLEENKEGGKGVEVSNEDSNRKLDIFRVHGFSILRTVYKNAVDALPYNFNLRKRFLEIVEATDLTHS

Click here to download the sequence:
Link to NCBI Protein BLAST