Transcript Information: R_Transcript_264265.p1


Annotated TAIR IDAT4G38020.1
Annotated Gene NametRNA/rRNA methyltransferase (SpoU) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:17861568-17863010 | Forward length=352
E-Value5E-72
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9349428573907
Replicate 23.1902505932891
Replicate 32.7520462129653
Condition 2: 8 Hour
Replicate 12.1630622744916
Replicate 22.844493803119
Replicate 33.3352782765375
Condition 3: 24 Hour
Replicate 13.7316577119236
Replicate 21.9483444249627
Replicate 32.5522765182601


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_264265.p1 GENE.R_Transcript_264265~~R_Transcript_264265.p1 ORF type:5prime_partial len:283 (+),score=44.96,SpoU_methylase|PF00588.15|1.4e-28 R_Transcript_264265:1-849(+)
GGGAAAAGTACACTTCTTGAGCTCAAATTCCCTCATTTTCTGTCTACTGATATTTGGGAACTTTTTTTATATATATATATATTGTGGCACAGGGAAATCTTTGAATTTCGTAAGTTGAACCAAGAGCAACAATTGAGAATTGAATGCGTTTTTTTGCTGGATAAAGCTGAGGTTCCTGAAGAAATATGTGATGCTCCAGGAGAGAGAGTCCAAGTGAGTTCTGTAGTGATGAAAAAACTCTCAGGGGTAAAATCAACTGAGTCTATTGATGCTATAGCTCTCATAAGAATTCCCCCCAGTTTTCTGAATTTGAATGATGAGTATGACCAATCATATATTATGGATTCTAAGAAATGGTTCCCATGTCTTCATCGAATTCTAGTGCTTGAAGGGATTCAGGATCCAGGAAACCTAGGTACATTGCTTAGATCTGCCTTGGCATTTAAATGGAATGGTGTCTTTTTGCTTCCTGGATGTTGTGATCCATTCAACGAGAAGGCAATCAGGGCAAGCAGAGGAGCTTCCTTCCAGCTGCCTATAGTATCTGGAACCTGGACCCATCTTGAAGCGCTAAAACATGAAGTTCAAATGAAGATGCTAGCTGGTCATCCTGACTGTAAGAATACCAGAAAGCCTGTTTTGAAGCTGTCGACAGGGCTCGCAAATTCTTTAACTGATACACCATTATCCTTAGTTCTGGGCAGTGAGGGGAGTGGCCTTTCAGTGAAAGCTAAGGAATTGTGTGAACTGGTGAGCATACCAATTTCAGAGCATTTTGAGTCTCTCAATGTAGCAGTAGCAGGTGGGATTTTTATGTTTGTACTGAAATCTGACAACCCTCAATCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_264265.p1 GENE.R_Transcript_264265~~R_Transcript_264265.p1 ORF type:5prime_partial len:283 (+),score=44.96,SpoU_methylase|PF00588.15|1.4e-28 R_Transcript_264265:1-849(+)
GKSTLLELKFPHFLSTDIWELFLYIYILWHREIFEFRKLNQEQQLRIECVFLLDKAEVPEEICDAPGERVQVSSVVMKKLSGVKSTESIDAIALIRIPPSFLNLNDEYDQSYIMDSKKWFPCLHRILVLEGIQDPGNLGTLLRSALAFKWNGVFLLPGCCDPFNEKAIRASRGASFQLPIVSGTWTHLEALKHEVQMKMLAGHPDCKNTRKPVLKLSTGLANSLTDTPLSLVLGSEGSGLSVKAKELCELVSIPISEHFESLNVAVAGGIFMFVLKSDNPQS*

Click here to download the sequence:
Link to NCBI Protein BLAST