Transcript Information: R_Transcript_264587.p1


Annotated TAIR IDAT3G07880.1
Annotated Gene NameImmunoglobulin E-set superfamily protein
Annotated Gene Symbol(s)SCN1
Annotation TypeOrtholog
Chromosome Positionchr3:2514175-2515544 | Forward length=240
E-Value5.4E-108
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.4802722343401
Replicate 24.9627619165795
Replicate 34.6854690537584
Condition 2: 8 Hour
Replicate 13.5615803559629
Replicate 22.9475707881563
Replicate 34.2078733710897
Condition 3: 24 Hour
Replicate 14.9046224531913
Replicate 24.010047071014
Replicate 35.1734574714485


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_264587.p1 GENE.R_Transcript_264587~~R_Transcript_264587.p1 ORF type:complete len:220 (+),score=51.59,Rho_GDI|PF02115.13|8.8e-79 R_Transcript_264587:438-1097(+)
ATGGGGCTTGATGAGGAGAACAAAGAGGGTGAGAAACCCAATGAAGAGAATGATGATTTATCAAAGCAAATGAGTGATGCTACTGTGACCGATCAAGACGATGAAGAGTATGATGGCAAGATTGATTTGGGTCCTCAATGCTCCCTTAAAGATCAATTAGAGAAAGATAAAGATGATGAGAGTTTGAGGAAGTGGAAGGAACAACTCCTCGGAAGTGTTGACTTGAACGAAATTGGAGAAGCATTAGAACCAGAGGTGAAGATTCTGAGCCTTTCGATCGTCTCACCAGAGAGAGAAGACATTTTCCTTCCAATTCCAGAGGATGGAAAACCAAAAACACCATGGTTTACATTGAAGGAAGGCAGTCGTTACAACTTAAAGTTTACTTTCCAGGTTAATCACAACATTGTGGTAGGCCTCAAGTACACCAACACTGTGTGGAAAACTGGCTTGAAAGTGGATAGCACAAAAGAGATGCTTGGAACCTTTAGTCCTCAAGCAGAGCCATACACGCACGAGATGCCAGAGGAAATCACTCCCTCTGGCTATTTTGCCCGAGGATCATATACTGCTAAAACTAAGTTTCTTGATGATGATAACAAATGCTACTTAGAGATCAATTACACATTCGACATTCGTAAAGACTGGTTGAGTACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_264587.p1 GENE.R_Transcript_264587~~R_Transcript_264587.p1 ORF type:complete len:220 (+),score=51.59,Rho_GDI|PF02115.13|8.8e-79 R_Transcript_264587:438-1097(+)
MGLDEENKEGEKPNEENDDLSKQMSDATVTDQDDEEYDGKIDLGPQCSLKDQLEKDKDDESLRKWKEQLLGSVDLNEIGEALEPEVKILSLSIVSPEREDIFLPIPEDGKPKTPWFTLKEGSRYNLKFTFQVNHNIVVGLKYTNTVWKTGLKVDSTKEMLGTFSPQAEPYTHEMPEEITPSGYFARGSYTAKTKFLDDDNKCYLEINYTFDIRKDWLST*

Click here to download the sequence:
Link to NCBI Protein BLAST