Transcript Information: R_Transcript_26460.p1


Annotated TAIR IDAT5G45290.2
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:18350011-18352092 | Reverse length=546
E-Value4E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 159.873723571248
Replicate 240.185226987237
Replicate 344.680724432056
Condition 2: 8 Hour
Replicate 136.549413794881
Replicate 248.980979271168
Replicate 351.695521089197
Condition 3: 24 Hour
Replicate 140.617658941323
Replicate 233.446436559337
Replicate 345.138379995323


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_26460.p1 GENE.R_Transcript_26460~~R_Transcript_26460.p1 ORF type:5prime_partial len:546 (+),score=123.09,zf-RING_2|PF13639.2|7.9e-14,zf-RING_11|PF17123.1|2.4e-09,zf-rbx1|PF12678.3|9.8e-09,zf-C3HC4|PF00097.21|6.7e+03,zf-C3HC4|PF00097.21|7.4e-06,zf-RING_5|PF14634.2|2.7e-05 R_Transcript_26460:2-1639(+)
AATAATAATAATAACAAAGTCAACCGCACCAAACAAAGGCTTGCTTCTTTTATATGTGGCGCTTCTTCTTCTTCTTCTTCTTCTTCAAGTTCTTCTCGTAATCAGACAGAAGATTGTGCAGCTGAATCTCCAGTGGGTTCGGTGGAGTACTGTCAACAAGTAGCTGATAAGTTGCCAATAACTACAAATGAGTCTATTTTGATCTCCAATGAAGGTTCTGAGTTTACCAGCAGGTCCAGCCCTAGGTCTGAACCTGGAGCTTCATCAGAGAGCATTATTACAAGTAATGAGCATGCTTTCATCGAACGTGAATCATCTAGTAAGAGGAAATGGTTTTCTGAAAGTGATGAAGTAGTTCCTTCCCCTCCATCCAATGGTGAAAGTAAGTGTTATCAGCAAACAATGGATGATAGTGTTAGTGCTCCTTGTACAGGGCAAATACGGCCAGTAAGTGTCAATCCCAACAGACTTGCAGGCAATGATGTCGATGACTTAGTGAACATCGATATGCCTCAGACTAGTCAAGAAGCCATATCTCCAATTTCAAGCAGTGTACAGCACGAAGATATAGAACAACTGCCTACATTTTTAGGCGAAATTAATCGAACTATGGGAAGTCACAATTCATATTCTGGTCCAGTCCCAGTTGCACCTGAATATGCCATAGCTTCTCAATCAAATGCTAATGAGTCCAGTCCGGAGGTGGTGCCTCCAGGGTTAGGGCTCTTTGTATCTGACAGGGTCCAAGCTCGGCCAGATGGAAGTGTGCTTCATGTTGATGTGGTGAGTATTTCTTCCAATATCTTGCCTAACAGCAACAATGAAATAAGCACCCGGGAAGCAAGAAGAAACAATAGACGAATGTTCTGGGATGCTTTTTCAAGTCGCAGTTCGAGAAGGCAAGCTGATTTTCCGGCCATACTTTTTACAACTGAAGATGCTGATCTTATGGGATCTCGTCGCAGATGGCTTCTTGATATTGGCGATGATTTCTTTGATGATGGGGTTGGTGGAGATTCTTGGCACTTTGGCAGGAGAAGTCGTGCTACTAGTGAACGCCGTCGGAACTCCAGATCTGAGTTCTGGGATAGACTCCGAGGTGCTGCTAGTGAGAGTAGTCATCGTTCTAGCTGTCCCTTTGACTTGCACCCTGATGGTTCATGTTCATGTGAGTTAGACGAAGAGACCAGTGCCCTTACAAGTATATCTCGTATTGTTCTGCTTGCAGAAGCTTTATTTGAGGTTTTGGATGAAATTCACCGCCAGCCAGACTCATTTTCACTGTCTATGCTTTCTGTTCCTGCTCCTGAGTCAGTTGTGGATTCACTTCCTCTTAAGATCTATGAGAAACCTAATAGAGCTGATCGTGAAGATGAAAAACTTAATACAGCTAATCATGGAGATGAAAAGCGTAATGCAGCTGATTCTAATGACGATGTGGACCAGTGCTATATATGTCTAGTGGAGTATGAAGAAGGTGATAAAATACGAGTTCTTCCTTGTCACCATGTCTATCACATGTCATGTGTTGATAAATGGCTGAAAGAAGTCCATGGCATATGTCCACTTTGTCGTGGAGATGTTCGAGGAGGGGTCAGAGAGGGCACTGCATCCAGCTCAAATGCAGATCTCACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_26460.p1 GENE.R_Transcript_26460~~R_Transcript_26460.p1 ORF type:5prime_partial len:546 (+),score=123.09,zf-RING_2|PF13639.2|7.9e-14,zf-RING_11|PF17123.1|2.4e-09,zf-rbx1|PF12678.3|9.8e-09,zf-C3HC4|PF00097.21|6.7e+03,zf-C3HC4|PF00097.21|7.4e-06,zf-RING_5|PF14634.2|2.7e-05 R_Transcript_26460:2-1639(+)
NNNNNKVNRTKQRLASFICGASSSSSSSSSSSRNQTEDCAAESPVGSVEYCQQVADKLPITTNESILISNEGSEFTSRSSPRSEPGASSESIITSNEHAFIERESSSKRKWFSESDEVVPSPPSNGESKCYQQTMDDSVSAPCTGQIRPVSVNPNRLAGNDVDDLVNIDMPQTSQEAISPISSSVQHEDIEQLPTFLGEINRTMGSHNSYSGPVPVAPEYAIASQSNANESSPEVVPPGLGLFVSDRVQARPDGSVLHVDVVSISSNILPNSNNEISTREARRNNRRMFWDAFSSRSSRRQADFPAILFTTEDADLMGSRRRWLLDIGDDFFDDGVGGDSWHFGRRSRATSERRRNSRSEFWDRLRGAASESSHRSSCPFDLHPDGSCSCELDEETSALTSISRIVLLAEALFEVLDEIHRQPDSFSLSMLSVPAPESVVDSLPLKIYEKPNRADREDEKLNTANHGDEKRNAADSNDDVDQCYICLVEYEEGDKIRVLPCHHVYHMSCVDKWLKEVHGICPLCRGDVRGGVREGTASSSNADLT*

Click here to download the sequence:
Link to NCBI Protein BLAST