Transcript Information: R_Transcript_264793.p2


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value3E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.37732219027842
Replicate 20
Replicate 30.11838107284833
Condition 2: 8 Hour
Replicate 10.18981290656779
Replicate 20.057780056437172
Replicate 30.32832370631191
Condition 3: 24 Hour
Replicate 10.23728999718557
Replicate 20.17097099915176
Replicate 30.11311475290386


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_264793.p2 GENE.R_Transcript_264793~~R_Transcript_264793.p2 ORF type:complete len:387 (+),score=33.78,RVT_1|PF00078.23|4.2e-43 R_Transcript_264793:359-1519(+)
ATGGATCCACACAAGGCCCCTGGCCCAGATGGATTCCAAGCACTGTTCTTTCAGAAGCAGTGGAGCACAGTCAAGACCTCTTTCTGCAAGACTGCCTTGGATGTTCTTAGGGGGCGAGCGCTGCCAACTGGCCTTAATGAGACACATCTAGTGTTGATCCCCAAGGGCGATCAACCAAGCAAGGTAACTGACTTCAGGCCTATTAGCTTATGTAACGTTGTGTATAAAGCGATTACTAAAGCAATAGTGAGTCGGCTGAAACCTATCCTTCCCTTGATGACTTCCCCGACGCAAGGAGCTTTTGTCCCTGGACGTCAAATAGCAGATAATATTGTCATAGTTCAAGAAGCTCTTCACACAATGCGCTCGAAACAAGGGAACAAGGGATTTATGGCGATCAAAATTGACCTTGCCAAAGCTTACGATCGTTTGAGATGGAATTTTATAGAAGACACTCTGATAAATATGGGCTTACCTATATTTTTGAAAGAGATCATCATGATGTGCGTATCGTCACCTAGCTTTCGCATATTATGGAATGGGACCCCAACTCAACCCTTCTCTCCTACAAGGGGCATTAGACAAGGTGACCCTTTATCACCCTATCTATTTGTCTTATGCATGGAAAGATTAAGCCATTTGATTGAGGAATCTCTAGCGACGGGTATTTGGAAGCCAATTCGGTGTAGTAGAAATGACCCTCCCATCTCGCACTTATTTTTTGCGGATGATATAGTCTTATTTTCTGAAGCTTCGAGTGCACAAGCTGTGATCATAAAAGAGTGCTTGCAGCGTTTCTGTGAGGAATCTGGGGAGTTGGTATCTTTACCAAAGTCCCGCATATTTTTCTGTCCTAATGTGCCAGCTGATGTGAGCTCCTCAATATGTGACTATATGGGAATTTCAGCCACTGAAGATCTTGGTTTTTACCTCGGAATGCCTTCTATTCATGGCCGAGTCACAAAGAGCACCTTCCAATATATTATTGATAAATTCGACAAAAAACTAAGTGGATGGAAGGCTCATTGTCTTTCGTTGGCAGGTCGTGCAACTCTTTCTAAATCAGTACTTTCTACACTTGCATATTACTCCATGCAAACTGCCAAACTACCTAAAGGAGTATGTGATGAGGTGGATAGAAAAGTTCGTCGTTTTCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_264793.p2 GENE.R_Transcript_264793~~R_Transcript_264793.p2 ORF type:complete len:387 (+),score=33.78,RVT_1|PF00078.23|4.2e-43 R_Transcript_264793:359-1519(+)
MDPHKAPGPDGFQALFFQKQWSTVKTSFCKTALDVLRGRALPTGLNETHLVLIPKGDQPSKVTDFRPISLCNVVYKAITKAIVSRLKPILPLMTSPTQGAFVPGRQIADNIVIVQEALHTMRSKQGNKGFMAIKIDLAKAYDRLRWNFIEDTLINMGLPIFLKEIIMMCVSSPSFRILWNGTPTQPFSPTRGIRQGDPLSPYLFVLCMERLSHLIEESLATGIWKPIRCSRNDPPISHLFFADDIVLFSEASSAQAVIIKECLQRFCEESGELVSLPKSRIFFCPNVPADVSSSICDYMGISATEDLGFYLGMPSIHGRVTKSTFQYIIDKFDKKLSGWKAHCLSLAGRATLSKSVLSTLAYYSMQTAKLPKGVCDEVDRKVRRFL*

Click here to download the sequence:
Link to NCBI Protein BLAST