Transcript Information: R_Transcript_264883.p1


Annotated TAIR IDATMG00310.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)ORF154
Annotation TypeHomolog
Chromosome PositionchrM:90883-91347 | Reverse length=154
E-Value2E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.16046559081071
Replicate 20.09229143040131
Replicate 30.20137791293321
Condition 2: 8 Hour
Replicate 10.32289052677686
Replicate 20.29486877153212
Replicate 30.11968094914541
Condition 3: 24 Hour
Replicate 10.10091343836354
Replicate 20.048473096462807
Replicate 30.048104845465708


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_264883.p1 GENE.R_Transcript_264883~~R_Transcript_264883.p1 ORF type:5prime_partial len:455 (+),score=46.47,RVT_1|PF00078.23|3.9e-37,RVT_1|PF00078.23|6.6e+03 R_Transcript_264883:1-1365(+)
CCTCTCTTTTTCCAAACGTACTGGCACATAATTGAGATTGATATTGTTGATATTGTTCTAAAGTACTTAAATGAGGGTCATATGCCTGATGGTTTAAATCATACTTTTATTGTTCTTATCCCCAAGAAGAAAAAGCCAGAGAGGATAACTGAGTATAGACCCATTAGCCTTTGCAATGTACTGTATAAGCTAATCTCCAAAGTCCTTGCAAATAGACTCAAATCAATCCTCCCAGAGGTAGTATCCCTAAACCAGAGTGCTTTTACCCCAGGGCGCCTTATCACGGACAACATTCTAATGGCTTTTGAGATGTTTCATTTTATGAAATATTCGAAGCAGAAGGAGGGTTATGCTGCTCTCAAGTTTGACATGGCCAAGGCCTATGATAGAGTGGAGTGGGAGTTCCTACATAGAGTGCTTCTCACCCTTGGGTTTCATGAGAATTGGGTGGTACGGGTTATGGGGTGTGTTAGTACAGTGTCTTTCTCTATCCTTAACAATGGAAAACCTACTGACATGTTTTCTCCAACCCGGGGACTCCGTCAGGGAGATCCCATTTCACCTTATCTCTTTATACTGGTGGCGGAGGCTCTTTCGGGTCTAATTCGCAAGGCTTGTGAAGACGGGAGTCTGCATGGGGTTCAAATATGTCCGCATGGTCCAGTTATTTCCCATCTATTTTTCACCGACGATAGTCTCCTTTTCTTCAAGGCAACAGTGGAACAAGCCGCTACTCTTAAAAGGATTCTTAGCATGTATGAGCTAGTGTCGGGCCAGAAGGTGAGTTATGAAAAATCCCAAGCCTCTTTTAGTCTAGGGGTTGAGACGACTTGTCGAGAAGCTATTGTCAGGGAACTTGAGGTCAACGAAGTTGCTGCCCATGAAAGGTATTTAGGTCTTCCCATGTCTTTGGGGAGGTCTAAGCAAAGTCTCTCGGGCCCCCTGAAAGAAAGACTATGGAAGAAGCTGCAGGGTTGGAAAGGTATGTTGTTATCTAAGGCAGGTAGAGAGGTCATGATTAAAGCGGTGGCTCAATCTATCTCTACCTATGCAATGAGTGTTTTTAAATTCTCAACTACTTTTTGCAACGAAGTTCGATCTATGGTCTCGCAATTTTTCTGGGGGCAAAAAAAGGAGAGGAAGATGCATTGGGTGGCTTGGAGTAAGTTGTGTCAACCAAAAGGCAAAGGGGGAATGGGGTTCCGAGACTTAAAGCTATTTAACTGGGCCTTGTTGGGCAAACAAGCGTGGAGATTGGCTCGAGGAGAGGGTGGTCTGTTGCAGCAATTGTATAAAGCAAGGTACTACCCCCAAGGAGATTTCCTGTCCACAGGGGTAGGTACAAACCCAAGCTATACATGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_264883.p1 GENE.R_Transcript_264883~~R_Transcript_264883.p1 ORF type:5prime_partial len:455 (+),score=46.47,RVT_1|PF00078.23|3.9e-37,RVT_1|PF00078.23|6.6e+03 R_Transcript_264883:1-1365(+)
PLFFQTYWHIIEIDIVDIVLKYLNEGHMPDGLNHTFIVLIPKKKKPERITEYRPISLCNVLYKLISKVLANRLKSILPEVVSLNQSAFTPGRLITDNILMAFEMFHFMKYSKQKEGYAALKFDMAKAYDRVEWEFLHRVLLTLGFHENWVVRVMGCVSTVSFSILNNGKPTDMFSPTRGLRQGDPISPYLFILVAEALSGLIRKACEDGSLHGVQICPHGPVISHLFFTDDSLLFFKATVEQAATLKRILSMYELVSGQKVSYEKSQASFSLGVETTCREAIVRELEVNEVAAHERYLGLPMSLGRSKQSLSGPLKERLWKKLQGWKGMLLSKAGREVMIKAVAQSISTYAMSVFKFSTTFCNEVRSMVSQFFWGQKKERKMHWVAWSKLCQPKGKGGMGFRDLKLFNWALLGKQAWRLARGEGGLLQQLYKARYYPQGDFLSTGVGTNPSYTW*

Click here to download the sequence:
Link to NCBI Protein BLAST