Transcript Information: R_Transcript_264885.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value9E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.31799583544806
Replicate 20.31701731174434
Replicate 30.239443250134
Condition 2: 8 Hour
Replicate 10.14219433767274
Replicate 20.077912480282877
Replicate 30.18973809010858
Condition 3: 24 Hour
Replicate 10.13332059946402
Replicate 20.28177450382851
Replicate 30.35589763718532


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_264885.p1 GENE.R_Transcript_264885~~R_Transcript_264885.p1 ORF type:5prime_partial len:861 (+),score=79.19,RVT_1|PF00078.23|3.2e-39,zf-RVT|PF13966.2|6.1e+03,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|3.7e-12,zf-RVT|PF13966.2|1.6e+04 R_Transcript_264885:3-2585(+)
TTCATCAAAAGTCTTGTTGATGAGGAGGGCGTGATGTGGGAGGGGGACGAAAAGATTGGACAAGAGGCAGTACGCTATTTTTCTTCACTGTTCGCTGCTTCTTCTTGTAATTACACGGAGGAGGCCCTCCTTGGAGTCGATCCACGAGTCACTGCAGACATGAATGTATCACTTACAGCCCCTTACTCGGCAGAGGAGATAAAACTGGCACTTGGGCAAATGCACCCACTCAAAGCTCCAGGACCAGATGGTATGAATCCTTTCTTTTTTCAAACTTACTGGCATATAGTAGGCAATGATGTTTCTGCGCTGGTTATGGATTATTTGAATGGGGGGAATATGGATCAAGGTCTTAACCACACTTTTCTTGTCCTTATCCCAAAAAAGAAAAACCCCGAAAAAATAACTGATTTTCGCCCTATTAGCTTATGTAATGTTGTTTATAAGTTAATCTCTAAAGTGTTGGCTAACCGTCTAAAAGCAATTCTCCCTGGAATTATTTCCTTGAACCAAAGTGCCTTTATCCCTGGTAGACTAATAACTGATAATATCCTTATGGCCTTCGAGACCTTCCACTACATGAAACTTTCTAAGTCTCGTGAGGGGTACGCGGCCTTAAAATTAGACATGGCCAAGGCTTATGACCGTGTTGAGTGGAGCTTTTTACGGAGGGTGCTGGTTAAGTTGGGTTTTGATATTCAATGGTTGGAAAGGGTTATGGGGTGTGTCACTTCGGTTTCCTTTTCAATTCTGATAAATGGTAACCCCACAAAAGTTTTTTCCCCTCGTCGTGGTCTCCGACAAGGAGACCCGATATCCCCGTACTTATTCATTCTAGTGGCTGAAGTCTTGTCAGGTTTGATTCGGAAGGCTAACGAAGATCTAGTGCTGCATGGAGTAAAAATTTGTGAGCATGCTCCGACAATATCACACTTATTCTTTGCAGATGATAGCATGCTATTTTTCAAAGCAACATGCAAGCAAGCTAAAGCTATAAAAAATGTGCTGGTTCTATACGAAGAAGCGTCGGGGCAGAAAATAAGTTTTGAGAAGTCACAGGTTTGGTTCAGCCCTGGGGTGGATACTGATCGAAGAGAAGCCATGGTGGAAAGATTGGGGGTTGAGGAAGTCCGACAGCATGAAAGATATCTCGGCCTCCCACTGATGTTGGGTAGGTCGAAGAGAAGCTTAAGTAGGCCACTAAAAGAACGGTTGTGGAAAAAACTCCAAGGGTGGAAAAGCGCTTTGTTATCTAAAGCGGGTAGGGAGGTGCTGATCAAGGCTGTGGCTCAATCCATCTCCACATATGCTATGAGTGTGTTCAAATTTTCAGCGGCGTTTTGCAATGAGGTGAGGTCTATGGTTTCCCGATTTTTTTGGGGTCAGCGTAGAGAGGAGAGGAAGATACATTGGGTAGCGTGGCATAACTTGTGTAAATCAAAAAAACAAGGAGGTTTGGGCTTCCGTGACCTCAAGATGTTTAACTGGGCCTTGTTGGGCAAACAAGCGTGGAGGCTTGCAAAGGGAGAGGGTGGGCTACTGGAGCAACTTTATAGGGCACGGTACTATCCGAATGGGACTTTTCTAGCCTCTCATCTCGGGCAGAACCCAAGCTACACTTGGAGGGGGATTTGGGAGGCCAGGTGGGTGATTCGGAAAGGAATGAGGTGGAGAATCGGTAATGGTGATAGTGTTAAAGTCTGGGATGATCCCTGGATACCAAAGGAAGGCACGTGGACAGTGGTTTCGCCCGTTGGAAATCACGACCCAAACATGCTTGTAGCCTCCCTCATTGATCCAATGAGAGCTGCTTGGAGAAAGGAGGCGTTGCACGAAATGTTTCTCCCTTTTGAAGCTGAACAGATATGTGATATCCCACTAAGCTCACGCCTCCCACCAGATTTTCTGTACTGGGGCTGGGACAAGAAAGGAGCTTATACAGTCCGGAGTGCATACCACGGTATCTCTAGTGCTAGTGTTAACGTGGAGTTAGCATCTTCTTCATCAACGAATTTGAGCTTATGGCGGAAGTTATGGGGGCTAGATTTTTTCCCTCGGGTCAAAATGTTTCTATGGCACTGGTGTAATCAAGCACTCCCCACCAAAGTGGCTATCAACCGAAGGATAAGTACTTTCTCAAAGCTTTGCGAAGTGTGTAAAACGGACAACGAAGATGAGCTACACGCAATTTGTTTGTGCCCGAGGGCGATGGAGGTCTGGAACCGATGTGAGATCGACATCCCAGTGGTTCCCCGGGGTCTGTCAGCCCGTCAGTGGGTTGAGCTGCTTGCCGAAAAGCTTACAGAGAAGGATCTTGCCTGGTTCTGCTGGGTTGCTTGGGCGGTTTGGGGTGGGCGTAACCGTTGGATCTTCCAAGGTCAGTATGATACGGCGGACGAACTTGTTGCTTATGCTAGGAGAATGGCAGGTGGTAGGGGGAGTGTAATGCCCAGCAACGCGGTTTTCGGCCCAAAACCGAAGGGGAAGTGGTGCCTACCAGGCCATGGCTGCACTAAGGTGAATGTGGATGCGGGTCGTTTAGGGGACAGAGGTACTGGAATTGGTATCATATGCAGGCGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_264885.p1 GENE.R_Transcript_264885~~R_Transcript_264885.p1 ORF type:5prime_partial len:861 (+),score=79.19,RVT_1|PF00078.23|3.2e-39,zf-RVT|PF13966.2|6.1e+03,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|3.7e-12,zf-RVT|PF13966.2|1.6e+04 R_Transcript_264885:3-2585(+)
FIKSLVDEEGVMWEGDEKIGQEAVRYFSSLFAASSCNYTEEALLGVDPRVTADMNVSLTAPYSAEEIKLALGQMHPLKAPGPDGMNPFFFQTYWHIVGNDVSALVMDYLNGGNMDQGLNHTFLVLIPKKKNPEKITDFRPISLCNVVYKLISKVLANRLKAILPGIISLNQSAFIPGRLITDNILMAFETFHYMKLSKSREGYAALKLDMAKAYDRVEWSFLRRVLVKLGFDIQWLERVMGCVTSVSFSILINGNPTKVFSPRRGLRQGDPISPYLFILVAEVLSGLIRKANEDLVLHGVKICEHAPTISHLFFADDSMLFFKATCKQAKAIKNVLVLYEEASGQKISFEKSQVWFSPGVDTDRREAMVERLGVEEVRQHERYLGLPLMLGRSKRSLSRPLKERLWKKLQGWKSALLSKAGREVLIKAVAQSISTYAMSVFKFSAAFCNEVRSMVSRFFWGQRREERKIHWVAWHNLCKSKKQGGLGFRDLKMFNWALLGKQAWRLAKGEGGLLEQLYRARYYPNGTFLASHLGQNPSYTWRGIWEARWVIRKGMRWRIGNGDSVKVWDDPWIPKEGTWTVVSPVGNHDPNMLVASLIDPMRAAWRKEALHEMFLPFEAEQICDIPLSSRLPPDFLYWGWDKKGAYTVRSAYHGISSASVNVELASSSSTNLSLWRKLWGLDFFPRVKMFLWHWCNQALPTKVAINRRISTFSKLCEVCKTDNEDELHAICLCPRAMEVWNRCEIDIPVVPRGLSARQWVELLAEKLTEKDLAWFCWVAWAVWGGRNRWIFQGQYDTADELVAYARRMAGGRGSVMPSNAVFGPKPKGKWCLPGHGCTKVNVDAGRLGDRGTGIGIICRR*

Click here to download the sequence:
Link to NCBI Protein BLAST