Transcript Information: R_Transcript_26519.p1


Annotated TAIR IDAT5G65520.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:26189876-26190496 | Reverse length=206
E-Value5E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.655701688435
Replicate 217.344769909116
Replicate 320.643225975979
Condition 2: 8 Hour
Replicate 112.775233885519
Replicate 215.378630199076
Replicate 315.066554269886
Condition 3: 24 Hour
Replicate 119.600341348554
Replicate 219.788710546091
Replicate 315.053204013914


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_26519.p1 GENE.R_Transcript_26519~~R_Transcript_26519.p1 ORF type:complete len:253 (+),score=22.73,TPR_11|PF13414.2|37,TPR_11|PF13414.2|1,TPR_11|PF13414.2|9e-05,TPR_2|PF07719.13|2e+02,TPR_2|PF07719.13|5.4e+02,TPR_2|PF07719.13|9.5e+02,TPR_2|PF07719.13|1.5e+04,TPR_2|PF07719.13|3.5e-06,TPR_1|PF00515.24|5.5e+03,TPR_1|PF00515.24|1.6e+03,TPR_1|PF00515.24|8.3e-07,TPR_8|PF13181.2|3.7e+03,TPR_8|PF13181.2|5.9e+02,TPR_8|PF13181.2|9.2e-06,TPR_16|PF13432.2|1.4e+02,TPR_16|PF13432.2|2.7e+02,TPR_16|PF13432.2|0.0012,TPR_12|PF13424.2|1.5,TPR_12|PF13424.2|0.031 R_Transcript_26519:37-795(+)
ATGTTTACTAAAGTTGACTTGACCTTCTCAAAAGTCTCACTTCTTCCTTCCCCAAATCAAATACTGCTCTTTTCTCCCAAATTCTTCAAACAACAAACAAAAATGTCCATGTGGTGGGATCTCTCTCTCCAAGCCCTAATCTTCCTAATCGGAGGTTTCATGTACCTCTGGATGAACGACATCCCTCGCAAACTCCAAGCCAAGTACTTCACCTACCGCGACCGTCACAACCACCAAGCTCGCCGCCATTTCGTCAAAGCCGCCGAATACCTCTCCCAAACCCGCTCTAACCCTAACCCTAATCACTACCTGTCCTTAGCCGTCCAAGAGGCCGATCTGGCCGTCAAGCTGAACCCTACCGACGCAGCTAACCACATCATCAAAGCCCTAGCTCTCGAGCTCCAAGGCTTCAAGACCTCCGCTCTGGACTCCATTGACGCGGCTCTATCGCCTCTCGCGGTTAAGTCGCTGACGAGCGAGGAGAAGGCGGACGCGATGGTGAAGAGATCGCAGCTGAGGATGGAGGTGAGTCGACTTGGTGAGTCGGTGGACGAATCGGTGTGGGAGTCGGTGGAGGAGGAGCTGAGAAAGGCGGTTGACATGAGGCCTGGGAGTGGAAGAGCGTGGTGTTTGTTAGGGCAGTGTTGTGAGGGGTTGGAGAAGAGAGAGAGAGCCATTGAGGCGTTTCAGGAAGCGGTCAGGATTGAGCCTGACTCGGTCCTGGCTAAGAACGGGTTGGATCGGTTAGTTGCGGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_26519.p1 GENE.R_Transcript_26519~~R_Transcript_26519.p1 ORF type:complete len:253 (+),score=22.73,TPR_11|PF13414.2|37,TPR_11|PF13414.2|1,TPR_11|PF13414.2|9e-05,TPR_2|PF07719.13|2e+02,TPR_2|PF07719.13|5.4e+02,TPR_2|PF07719.13|9.5e+02,TPR_2|PF07719.13|1.5e+04,TPR_2|PF07719.13|3.5e-06,TPR_1|PF00515.24|5.5e+03,TPR_1|PF00515.24|1.6e+03,TPR_1|PF00515.24|8.3e-07,TPR_8|PF13181.2|3.7e+03,TPR_8|PF13181.2|5.9e+02,TPR_8|PF13181.2|9.2e-06,TPR_16|PF13432.2|1.4e+02,TPR_16|PF13432.2|2.7e+02,TPR_16|PF13432.2|0.0012,TPR_12|PF13424.2|1.5,TPR_12|PF13424.2|0.031 R_Transcript_26519:37-795(+)
MFTKVDLTFSKVSLLPSPNQILLFSPKFFKQQTKMSMWWDLSLQALIFLIGGFMYLWMNDIPRKLQAKYFTYRDRHNHQARRHFVKAAEYLSQTRSNPNPNHYLSLAVQEADLAVKLNPTDAANHIIKALALELQGFKTSALDSIDAALSPLAVKSLTSEEKADAMVKRSQLRMEVSRLGESVDESVWESVEEELRKAVDMRPGSGRAWCLLGQCCEGLEKRERAIEAFQEAVRIEPDSVLAKNGLDRLVAG*

Click here to download the sequence:
Link to NCBI Protein BLAST