Transcript Information: R_Transcript_265281.p1


Annotated TAIR IDAT5G41270.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: RNAse P, Rpr2/Rpp21 subunit (InterPro:IPR007175); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:16507797-16508813 | Forward length=258
E-Value1E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.2724322530555
Replicate 20.78344404538426
Replicate 30.85472901478181
Condition 2: 8 Hour
Replicate 10.1827303354272
Replicate 21.001233515277
Replicate 31.4900575882407
Condition 3: 24 Hour
Replicate 11.7132691960973
Replicate 20.16459148425804
Replicate 32.2867751165415


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_265281.p1 GENE.R_Transcript_265281~~R_Transcript_265281.p1 ORF type:3prime_partial len:134 (+),score=20.85,Rpr2|PF04032.12|1.1e-09 R_Transcript_265281:457-855(+)
ATGGGCAAGCGAGGAGGACGTGCAACAACATCCTCCTCATTTGGGCTTCTTCACACTCGCACACAGCTCTCTCTCAGAGAAGAAACCACTGGGAGAAAGCAATCCCACAATCCCAAATCCATATTGAAACTCAAGCACCTCCAGAATTTAGCTCAGTGGGCTGCCTCTGATCCCTCTTCGGGTTCCTTCTATGGTCGCCGTTTCGCTGAGTTTGGCGTGGTTTTGGGGATTTCCCCTAACCATTCTCTCTTTCCTTGCCAGAGATGCGAAGTTATTCTTCAACCTGGTTTCAACTGTAGTGTCAGAATTGAAAAAAACCGAAGCAAGAAGAGGCGACGATGCAGCAAAACTAATTCACCTACACAAAATAATGTGGTTTGCAATTGCCACTTGTGTTGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_265281.p1 GENE.R_Transcript_265281~~R_Transcript_265281.p1 ORF type:3prime_partial len:134 (+),score=20.85,Rpr2|PF04032.12|1.1e-09 R_Transcript_265281:457-855(+)
MGKRGGRATTSSSFGLLHTRTQLSLREETTGRKQSHNPKSILKLKHLQNLAQWAASDPSSGSFYGRRFAEFGVVLGISPNHSLFPCQRCEVILQPGFNCSVRIEKNRSKKRRRCSKTNSPTQNNVVCNCHLCW

Click here to download the sequence:
Link to NCBI Protein BLAST