Transcript Information: R_Transcript_26553.p1


Annotated TAIR IDAT4G28650.1
Annotated Gene NameLeucine-rich repeat transmembrane protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:14144155-14147276 | Reverse length=1013
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.5568056865079
Replicate 26.9918917889244
Replicate 310.620805643796
Condition 2: 8 Hour
Replicate 17.1918208440337
Replicate 25.0959966475001
Replicate 37.6493526091808
Condition 3: 24 Hour
Replicate 110.621932420676
Replicate 211.092625296636
Replicate 37.9337554316946


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_26553.p1 GENE.R_Transcript_26553~~R_Transcript_26553.p1 ORF type:complete len:1018 (+),score=191.90,Pkinase|PF00069.21|2.3e-46,LRR_8|PF13855.2|0.084,LRR_8|PF13855.2|9.4e-08,LRR_8|PF13855.2|0.89,LRR_8|PF13855.2|2.6e-05,LRR_8|PF13855.2|5.1e-05,LRR_8|PF13855.2|0.0057,LRR_8|PF13855.2|0.00036,LRR_8|PF13855.2|0.00036,LRR_8|PF13855.2|0.0026,LRR_8|PF13855.2|0.0025,LRR_8|PF13855.2|4.5e-07,LRR_8|PF13855.2|6.6e-09,Pkinase_Tyr|PF07714.13|2.7e-43,LRR_4|PF12799.3|0.77,LRR_4|PF12799.3|78,LRR_4|PF12799.3|2.8,LRR_4|PF12799.3|9.4,LRR_4|PF12799.3|0.19,LRR_4|PF12799.3|0.13,LRR_4|PF12799.3|0.0043,LRR_4|PF12799.3|0.046,LRR_4|PF12799.3|0.66,LRR_4|PF12799.3|46,LRR_4|PF12799.3|0.084,LRR_4|PF12799.3|0.021,LRR_4|PF12799.3|0.13,LRR_4|PF12799.3|0.019,LRR_1|PF00560.29|35,LRR_1|PF00560.29|48,LRR_1|PF00560.29|4.5e+02,LRR_1|PF00560.29|1.7e+02,LRR_1|PF00560.29|7e+02,LRR_1|PF00560.29|51,LRR_1|PF00560.29|6.7e+03,LRR_1|PF00560.29|5.4e+02,LRR_1|PF00560.29|64,LRR_1|PF00560.29|1.2e+03,LRR_1|PF00560.29|1.2e+03,LRR_1|PF00560.29|44,LRR_1|PF00560.29|45,LRR_1|PF00560.29|2.8e+03,LRR_1|PF00560.29|1.4,LRR_1|PF00560.29|4.2e+03,LRR_1|PF00560.29|1.4,LRR_1|PF00560.29|69,LRR_1|PF00560.29|1.1,LRR_1|PF00560.29|7.7e+02,LRRNT_2|PF08263.8|2.2e-08,LRRNT_2|PF08263.8|7.7e+03 R_Transcript_26553:259-3312(+)
ATGCAGCTCAAAAATCAGTTGCTGTTATTGTTGTTCTTGTTTTACAGTTACATTGGTAGGTACACTATCAGTGGGGCTGCTGATGAAGTTTCAATTGTTTTATCTATAAAAGAGAAATTCATTGATCCTTTGAACAAGCTTGATGATTGGAAGCTAAGCAATGGCTCAGCTCATTGCAGTTGGACAGGAGTTTCCTGCAATGCCTTGGGATGGATCGAGGAGCTCAATCTTTCCCACATGAATCTCAGTGGTAAAGTCTCTGATGAATTCCAACATCTGAGTTCCTTGAAGTCTCTGAACTTGTGCTGTAATGGGTTGTCATCATCTTTGCCAAGTTCCATCACCAATGTCACTTCTCTGAAGTTCATTGATGTGAGTCAGAATCAGTTTTCTGGGAGTTTTCCTGTGGGATTTGGGAGGTTTGATGGTTTGACATATCTAAATGCTTCTGGTAACAATTTTGAGGGTGAACTTCCTGGTGATGTGGGAAATGCTAGTTTGCTAGAGACTCTGGATTTCCGAGGAAGTTTCTTCGAGGGGTCAATTCCTGTCTCCTACATGAACTTGCAGAAGCTCAAGTTCTTGGGATTGTCAGGAAACAATCTGACTGGTCAGATTCCTGCTCAGCTAGGCCAGCTCTCGTCGTTGGAGACTATGATCCTTGGGTACAATTTTTACGAGAGTGGGATTCCGAAAGAGTTTGGTAAGCTTACTAATCTCAAGTACTTGGATTTGGCACTTGGCAATCTTGGTGGTGAAATTCCTGCTGAATTGGGCGGCTTAAGCCAGCTCGACACTCTTTACTTGTACAAGAATAACTTGACAGGTGAAATCCCATCCACCATTGGTAACCTTTCTTCCTTGATTCTCTTTGATGTATCGGATAATAAGTTGTCGGGGGAAATCCCAGCTGAGGTTGGTCAGTTGAAGAACTTGCAGCTGTTGAATCTGATGTGCAACCAGTTGAGTGGTTCGGTCCCTTCTGGGATTGGTCAGTTGTCTCAGTTGCAGGTTCTGGAGCTTTGGAACAACTCATTATCTGGTCCTTTGCCTAGTGATCTTGGCAGAAATGCGCCTTTGGAATGGTTGGATGTTTCGTCCAATTCATTCACAGGTGTAATCCCTGAAGGTATCTGTGATGGAGGTAATCTAACTAAGCTCATTTTGTTCAATAATGCATTTAATGGTTCTATACCAACAAGTTTGTCTAGATGTCACTCGTTAGTACGAGTTCGTGCACAGAATAATCACATTTCTGGGACTATACCTTTGGGTCTAGGAAAATTGAGTAGCCTTCAGAGGTTAGAATTAGCAAACAATAGTCTGACTGGTACAATTCCGAATGATCTTGCTTCTTCGTCTTCCCTCTCGTTCATTGATCTTTCGAGAATCCTCCTGAGATCTTCTCTACCATCGACAATCCTTTCGATTCCAAACCTCCAGAATTTTCTGGCATCAAACAATCAATTAGATGGAGAAATCCCAGATCAGTTTCAGGATTGCCCTTCACTTTCTATTCTTGATCTGTCATCAAACCATTTCTCCGGTACTATCCCAGCTAGCATAGCTTCCTGTGAGAAATTGGTGACTTTGAATCTTAAGAACAATGAATTGAATGGTGAGATCCCCAAATCGATTGCAATGATGTCCACATTGGCAGTTCTTGATCTATCCAACAACTCCCTGACAGGGAAAATTCCTGATCAATTTGGTAGTTCACCAGCTTTAGAGATGTTCAATGTTTCACACAACCAGCTCTCTGGCCCTGTCCCTGCAAATGGCATACTTCGGACGATCAGCCCAGCTGATCTAGCAGGAAATTCTGATCTCTGTGGTGGGGTACTCCCTCCTTGTTCTAGAGACTCGATGTATGGATCAGGCCATGGAAATCTCCATGCCAAACGCATCCTAACAGGATGGGCAATCGGAGTTTCTGTTGTTCTGACAATCGGGATCCTGATCCTAGGGGGAAACATCATGTATAAGAGATGGTACTCTAACGGGACATGCTTTGAGAGATATGACACAGGTGGTGGGGAGTGGCCATGGAGGCTAATGGCTTTCCAGAGGCTCGGTTTCACCAGTCATGACATCCTGTCATGTATCAAGGAGTCCAATGTGATTGGTATGGGAGCAACCGGGATAGTCTACAAGGCCGAAATGTCTAGGCTAAACATGGTGGTGGCAGTCAAGAAGCTGTGGAAATCAAACTCTGATATCGAGACAGGAAGTGGAAGTGGTGATCTTGTAGGGGAGGTGAACCTGCTAGGCAAGTTAAGGCATAGGAATATTGTGCGATTGTTGGGATTTCTCCACAATGACAAGGAAGCTATGATCATTTATGAGTATATGCATCACGGTAATCTTGGAGAAGCTTTACATGGAAAACAAGCCGGGAGGTTGTTAGTAGATTGGGTATCAAGATATAACATCGCGGTTGGTGTTGCTCAAGGCCTCGCTTACCTTCATCATGATTGCCACCCACCAGTTATTCACCGAGATGTCAAATCAAACAACATATTGCTGGATGCCAAGTTAGAAGCAAGGATCGCGGACTTTGGATTGGCTAAGATGATGCTGAGGAAGAATGAGACCGTCTCTATAGTCGCTGGATCTTATGGTTACATAGCCCCTGAGTATGGGTACACACTGAAGGTTGATGAGAAGAGCGATATCTACAGCTTTGGAGTGGTTCTCTTGGAGCTTCTAACAGGAAAAAGACCACTAGACCGTGAATTTGGTGAATCGACAGATGTTGTAGAATGGGTCAGAAACAAAGCAAGGAACAACAAACAATTAGAAGTGGTGCTTGACCCCAGCTTAGCAGGGAACTCTAAACTTGTCCAAGAGGAGATGCTGTTAGTATTTAGAATTGCGATGCTTTGCACCGCCAAGCAACCAAAGGACCGACCCTCAATGAGAGATGTCATAACAATGCTCGGAGAAGCAAAGCCTAGGAGGAAAAGCAGTAGCAATAGCAACGGTATAGCCACGATTAACAAAGACAAGGACAAACCAGTTTTTAGCCCCTCACCTGTAAATGGTCTTCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_26553.p1 GENE.R_Transcript_26553~~R_Transcript_26553.p1 ORF type:complete len:1018 (+),score=191.90,Pkinase|PF00069.21|2.3e-46,LRR_8|PF13855.2|0.084,LRR_8|PF13855.2|9.4e-08,LRR_8|PF13855.2|0.89,LRR_8|PF13855.2|2.6e-05,LRR_8|PF13855.2|5.1e-05,LRR_8|PF13855.2|0.0057,LRR_8|PF13855.2|0.00036,LRR_8|PF13855.2|0.00036,LRR_8|PF13855.2|0.0026,LRR_8|PF13855.2|0.0025,LRR_8|PF13855.2|4.5e-07,LRR_8|PF13855.2|6.6e-09,Pkinase_Tyr|PF07714.13|2.7e-43,LRR_4|PF12799.3|0.77,LRR_4|PF12799.3|78,LRR_4|PF12799.3|2.8,LRR_4|PF12799.3|9.4,LRR_4|PF12799.3|0.19,LRR_4|PF12799.3|0.13,LRR_4|PF12799.3|0.0043,LRR_4|PF12799.3|0.046,LRR_4|PF12799.3|0.66,LRR_4|PF12799.3|46,LRR_4|PF12799.3|0.084,LRR_4|PF12799.3|0.021,LRR_4|PF12799.3|0.13,LRR_4|PF12799.3|0.019,LRR_1|PF00560.29|35,LRR_1|PF00560.29|48,LRR_1|PF00560.29|4.5e+02,LRR_1|PF00560.29|1.7e+02,LRR_1|PF00560.29|7e+02,LRR_1|PF00560.29|51,LRR_1|PF00560.29|6.7e+03,LRR_1|PF00560.29|5.4e+02,LRR_1|PF00560.29|64,LRR_1|PF00560.29|1.2e+03,LRR_1|PF00560.29|1.2e+03,LRR_1|PF00560.29|44,LRR_1|PF00560.29|45,LRR_1|PF00560.29|2.8e+03,LRR_1|PF00560.29|1.4,LRR_1|PF00560.29|4.2e+03,LRR_1|PF00560.29|1.4,LRR_1|PF00560.29|69,LRR_1|PF00560.29|1.1,LRR_1|PF00560.29|7.7e+02,LRRNT_2|PF08263.8|2.2e-08,LRRNT_2|PF08263.8|7.7e+03 R_Transcript_26553:259-3312(+)
MQLKNQLLLLLFLFYSYIGRYTISGAADEVSIVLSIKEKFIDPLNKLDDWKLSNGSAHCSWTGVSCNALGWIEELNLSHMNLSGKVSDEFQHLSSLKSLNLCCNGLSSSLPSSITNVTSLKFIDVSQNQFSGSFPVGFGRFDGLTYLNASGNNFEGELPGDVGNASLLETLDFRGSFFEGSIPVSYMNLQKLKFLGLSGNNLTGQIPAQLGQLSSLETMILGYNFYESGIPKEFGKLTNLKYLDLALGNLGGEIPAELGGLSQLDTLYLYKNNLTGEIPSTIGNLSSLILFDVSDNKLSGEIPAEVGQLKNLQLLNLMCNQLSGSVPSGIGQLSQLQVLELWNNSLSGPLPSDLGRNAPLEWLDVSSNSFTGVIPEGICDGGNLTKLILFNNAFNGSIPTSLSRCHSLVRVRAQNNHISGTIPLGLGKLSSLQRLELANNSLTGTIPNDLASSSSLSFIDLSRILLRSSLPSTILSIPNLQNFLASNNQLDGEIPDQFQDCPSLSILDLSSNHFSGTIPASIASCEKLVTLNLKNNELNGEIPKSIAMMSTLAVLDLSNNSLTGKIPDQFGSSPALEMFNVSHNQLSGPVPANGILRTISPADLAGNSDLCGGVLPPCSRDSMYGSGHGNLHAKRILTGWAIGVSVVLTIGILILGGNIMYKRWYSNGTCFERYDTGGGEWPWRLMAFQRLGFTSHDILSCIKESNVIGMGATGIVYKAEMSRLNMVVAVKKLWKSNSDIETGSGSGDLVGEVNLLGKLRHRNIVRLLGFLHNDKEAMIIYEYMHHGNLGEALHGKQAGRLLVDWVSRYNIAVGVAQGLAYLHHDCHPPVIHRDVKSNNILLDAKLEARIADFGLAKMMLRKNETVSIVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKRPLDREFGESTDVVEWVRNKARNNKQLEVVLDPSLAGNSKLVQEEMLLVFRIAMLCTAKQPKDRPSMRDVITMLGEAKPRRKSSSNSNGIATINKDKDKPVFSPSPVNGLL*

Click here to download the sequence:
Link to NCBI Protein BLAST