Transcript Information: R_Transcript_265589.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value7E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.085962335378907
Replicate 30.25790595041727
Condition 2: 8 Hour
Replicate 10.10024919118627
Replicate 20.32042205299549
Replicate 30.39015744424578
Condition 3: 24 Hour
Replicate 10.11749133688692
Replicate 20.24831918914672
Replicate 30.26883567680938


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_265589.p1 GENE.R_Transcript_265589~~R_Transcript_265589.p1 ORF type:3prime_partial len:977 (+),score=98.79,RVT_1|PF00078.23|5.7e-41 R_Transcript_265589:926-3853(+)
ATGCCAACACCGCGAACAACCATGAAACTCTTAAGCTGGAATTGTCGGGGGTTGGGCAACCCTCGCACAGTTACTGCCCTCCGAGATCGATGCTGGAGGGAGCGCCCAAATATCGTTTTCCTAATGGAGGCGATGGTAGACAGTAGAATCCTAGACGATGTTCGAATGAGATGTGGTATGACTGGTGGTGTTAACTTGAGTAGCATTGGTAATTCGGGAGGCTTAGGTCTGTGGTGGCATGACTTAGATGTTCGAATAATTTCATACTCCAGACATCACTGTTTGGGAGAGATCCTAAATGATGCTGGAGATCCTATATGGGCGGTGGCAGGCGTCTATGGTTGGCCGGAGTCCACTAATAAACATCTCACATGGCAGCTGATACATGACTTAAAGGCTACCTGCAATGTTCCTATGATATTTTTTGGTGACTTTAATGAAATCACAGGTGGCCATGAGAAAGAAGGTGGTGTATCCAGGCAACAAAGTTGTATGGATGGCTTTAGAGAGGTTATTGATGTTTGTGGGCTGCGGGATTTGGGTTACAGAGGTCCAAAATTCACATGGCAGCGGGGGGCTATACGCGAACGGCTGGATCGTTTCCTAGCGGAGGAGGAATGGGCAGAATTATTCCCGCACGCTTGTGTAACCCATTTTCCAATATACAGCTCTGACCATTGTCAGATCCTTCTATCCTCTGAACAACAGACCCAAAGAAAAAGAGGCCGAAGAAGCTTCAAGTTCGAACCTGCTTGGCTTTCGCATGACGAGTGTCAACCTTTGGTCCAGCAAGCTTGGGAGGCTACCATAGGCTCACCGGTTGAAAAAATTGCTGGTTGTGGTGTAAGACTCTCTGAGTGGGCTAGACAAAAGTTCGGCAACGTCAAACGAAAAATCAAAGAGGCGGAAAAGGAATTGAGTGATCTCCAACTCTTGGCGCCATCGGCTGATGTTCTAGCAAAATGCAAGGACGTGGCTAGTAAGCTGGAATCCCTCTTGAAAGAAGATGAAACCTACTGGTATGTCCGAGCCCGAGCCAATGAGTTGAGAGACGGAGATAAAAATACGTCCTATTTCCACCATAAGGCGAATCAGAGACGACGGCGCAATTTAATCAAGGGGCTGTTGGACGATAACGGGGTTTGGACAGAATCTGAGGAGGACATTGAACGCATCATTATTGATTACTACAGTTCCCTTTTCACCTCGTTTGAACCGGTGAATCTAGACCCTGCACTAGAAGGAATCGAGCAGATTGTTACAGAGGAGATGAACGAAGACCTTATCAGAGATCCCACACCAGAGGAGATCTATGAAGCACTTAACCAAATGCACCCTACTAAGGCCCCAGGGCCTGACGGTATGCACGCCCTCCTTTATCAAAAATATTGGCATATTGTTGGCCCTGATGTTATTTCTTATGTTAAAAACTGGTGGAGTGGTTTAGTTGACATTTCACACAGCAATAGAACCAATATTGTGCTAATCCCAAAAGTTAAGGAGCCTAGAACTATACCTGAGTTTAGACCCATTAGTTTATGCAATACCCTCATCAAAATCATCACTAAAATGCTTGCTAATAGGCTAAAAACTCATCTTCCTATACTCATTTCGGCCAACCAAAGTGCTTTTGTTCCTAATAGACTCATTACTGATAATGCACTAGTGGCTTTTGAGATTTTTCATAAGATGAAGAGATCAAATGAGAGGAGACGTGGGAGCATGGCCTTAAAGCTTGACATGTCAAAAGCCTATGATAGGGTGGAATGGTCTTTTCTAGAGAAGTTAATGGAGAGAATGGGGTTTAGTTTGATATGGATTAATAAAGTGATGGATTGCCTCTCCAAGGTTTCTTATTCCTTGGTTGTCAATGGTTATGCAAAGGGGTCTATTTTGCCGTCGAGGGGGCTCCGTCAAGGAGACCCCTTATCTCCTTATCTTTTCATTTTATGTGCAGATGCTTTTTCCCGCTTGCTATCCAAAGCTGCAACAAATAATGAGATTCATGGTATCAAAGTGTGCCGCGGTGCGCCAACTGTATCACATCTTTTTTTCGCCGATGATAGTATCCTTTTTGCGAGGGCAAATCTCCAAGAATGCTCCAAGATAGCTAATATAATTAGCACCTATGAACGAGCATCAGGGCAGAAAATAAACTTTCAAAAAACAGAGATTTCCTTTAGCAAGAATGTGCCGACAGCAACTAGAAGTGATATTGTGTCCATGCTCGGCGTTAAAGAGGTTTGTAAGCATGAGAAATATTTAGGCCTACCAACTATAGTGGGAAAGTCTAAGAAGGCCATTTTTATGGGTCTTAGAGAGAGAATATGGAAGAAGCTACAGGGATGGAAAGAGAAACTTCTGTCAAGGCCGGGGAAGGAGGTCCTCATCAAGGCGGTTGCGCAGGCCATTCCTTTATACATGATGAGTATTTTTAGGCTTCCTGTTGAGCTTGTTGATGACATTCACGCTATCTTAGCACGCTTTTGGTGGGGAGCAAAAGATGGGGAGCGGAAGCTCCACTGGAAAAGTTGGGAATCACTTTGTCAACCGAAGTGTCAGGGTGGGATGGGCTTCCGTGATTTAAAAGTTTTCAACCAGGCGCTATTGGCTAAACAAGGATGGAGATTGGCTTTGGGGGGAAATTCTTTAATGCACCAGATCTTCAAAGCAAAATATTTCAAAAATTCAGATTTCTTGTCATCCTTTTTGGGAGGGGACCCAAGCTTTATTTGGCGGTGCATTTGGGGGGCGAAGTCTTTATTGCTTGAGGGATTAAGATGGAGAGTGGGGGATGGGCGACATATCAAAGTCTGGGATAGTGCTTGGCTCCCTGGTAACTCTTCTGCTATTGTTCCAATGCCTAACTTAGAAGTAGACCCTAATATGCTAGTAGGGGAATTAATTGATAAGGAAAATTGTAATACC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_265589.p1 GENE.R_Transcript_265589~~R_Transcript_265589.p1 ORF type:3prime_partial len:977 (+),score=98.79,RVT_1|PF00078.23|5.7e-41 R_Transcript_265589:926-3853(+)
MPTPRTTMKLLSWNCRGLGNPRTVTALRDRCWRERPNIVFLMEAMVDSRILDDVRMRCGMTGGVNLSSIGNSGGLGLWWHDLDVRIISYSRHHCLGEILNDAGDPIWAVAGVYGWPESTNKHLTWQLIHDLKATCNVPMIFFGDFNEITGGHEKEGGVSRQQSCMDGFREVIDVCGLRDLGYRGPKFTWQRGAIRERLDRFLAEEEWAELFPHACVTHFPIYSSDHCQILLSSEQQTQRKRGRRSFKFEPAWLSHDECQPLVQQAWEATIGSPVEKIAGCGVRLSEWARQKFGNVKRKIKEAEKELSDLQLLAPSADVLAKCKDVASKLESLLKEDETYWYVRARANELRDGDKNTSYFHHKANQRRRRNLIKGLLDDNGVWTESEEDIERIIIDYYSSLFTSFEPVNLDPALEGIEQIVTEEMNEDLIRDPTPEEIYEALNQMHPTKAPGPDGMHALLYQKYWHIVGPDVISYVKNWWSGLVDISHSNRTNIVLIPKVKEPRTIPEFRPISLCNTLIKIITKMLANRLKTHLPILISANQSAFVPNRLITDNALVAFEIFHKMKRSNERRRGSMALKLDMSKAYDRVEWSFLEKLMERMGFSLIWINKVMDCLSKVSYSLVVNGYAKGSILPSRGLRQGDPLSPYLFILCADAFSRLLSKAATNNEIHGIKVCRGAPTVSHLFFADDSILFARANLQECSKIANIISTYERASGQKINFQKTEISFSKNVPTATRSDIVSMLGVKEVCKHEKYLGLPTIVGKSKKAIFMGLRERIWKKLQGWKEKLLSRPGKEVLIKAVAQAIPLYMMSIFRLPVELVDDIHAILARFWWGAKDGERKLHWKSWESLCQPKCQGGMGFRDLKVFNQALLAKQGWRLALGGNSLMHQIFKAKYFKNSDFLSSFLGGDPSFIWRCIWGAKSLLLEGLRWRVGDGRHIKVWDSAWLPGNSSAIVPMPNLEVDPNMLVGELIDKENCNT

Click here to download the sequence:
Link to NCBI Protein BLAST