Transcript Information: R_Transcript_266231.p1


Annotated TAIR IDAT5G41790.1
Annotated Gene NameCOP1-interactive protein 1
Annotated Gene Symbol(s)CIP1
Annotation TypeHomolog
Chromosome Positionchr5:16727530-16732391 | Forward length=1586
E-Value2E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8804708435077
Replicate 22.6947123528939
Replicate 32.6949103054297
Condition 2: 8 Hour
Replicate 11.0475236341067
Replicate 21.4349228988996
Replicate 31.2618766741445
Condition 3: 24 Hour
Replicate 13.1919945878091
Replicate 20.94354048729742
Replicate 34.3307223177284


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_266231.p1 GENE.R_Transcript_266231~~R_Transcript_266231.p1 ORF type:internal len:187 (-),score=61.67,KIP1|PF07765.8|1e-11 R_Transcript_266231:1-558(-)
ACTACTCTGTGCTGCTTCCAGCTTAAATTTTCCAGTGAAGCAAGTTTGAGGTGGAGAAGTGAAGTAAAGATGGGAAAGAGAAATCATCATGTGAGGAGGTCACTGAAGTCCTTTTTTCAGAAGCATGCTGATCCTGAGAAACATGAGAAGCTGAAAGAAGGAAGAAAAGATATGGAGGAGAAGAAGAAAAAGATATTGGATCTCCTGGAAAGCCATGATGAAAATGATGGAAACCAAATTCATGAATCAAAAAAAGGGCCAATCACGGAGCTCCTTGAGGAATTCCACAGACACTATGAATCACTTTTTTCTCACTATGATCATCTAGCTGGGGAACTCAAGGACAAAGTTGACAAACATCAGCTGAAGAAAGAGACGTTCTCTTCTGACTCAGACGCAGGCTCAGACTCCGAGCATGGTGATTCCACCAATGGCAATGATGGAAATGTCGAGAATGATATTCTTCCATCTGCAGCAATAGATGGGCTCCAGAAAGAGCTTGAAGCAGCAACCACGGAGCTCACAGACCTCAAGAACAATTTGACAGCCGTAAGCAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_266231.p1 GENE.R_Transcript_266231~~R_Transcript_266231.p1 ORF type:internal len:187 (-),score=61.67,KIP1|PF07765.8|1e-11 R_Transcript_266231:1-558(-)
TTLCCFQLKFSSEASLRWRSEVKMGKRNHHVRRSLKSFFQKHADPEKHEKLKEGRKDMEEKKKKILDLLESHDENDGNQIHESKKGPITELLEEFHRHYESLFSHYDHLAGELKDKVDKHQLKKETFSSDSDAGSDSEHGDSTNGNDGNVENDILPSAAIDGLQKELEAATTELTDLKNNLTAVSN

Click here to download the sequence:
Link to NCBI Protein BLAST