Transcript Information: R_Transcript_266391.p1


Annotated TAIR IDAT3G01680.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:252033-255246 | Forward length=740
E-Value6E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.57239250380651
Replicate 20
Replicate 30.079814416711333
Condition 2: 8 Hour
Replicate 10
Replicate 20.23373744084863
Replicate 30.12649206007238
Condition 3: 24 Hour
Replicate 10.079992359678412
Replicate 20.38423795976615
Replicate 30.15252755879371


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_266391.p1 GENE.R_Transcript_266391~~R_Transcript_266391.p1 ORF type:3prime_partial len:287 (+),score=30.71,SEO_N|PF14576.2|3.7e-60 R_Transcript_266391:85-858(+)
ATGGCAGTTGTTAAGAGATTGCCTATGGTGGTCGAACAATATCCGGAATCCTTTAAGCCTCAGCACGATGCCATCAACAACCTCATCATGGCTATGCTTGAGGTTACAAGTTGCATTGTTGAATTTGGAGAGTTACCTTCAATTTATGTCACAGATGAAGATCCTCAAGTCAAGATTGCACTCAGCCATTTTCCAATTGCTGTTTATTGGATTGTTAGAAGCGTTGTTTCAGCTGCTAGCCAAATTACAACTTTATCGCGAGTGGGGCTTGAATATGTGGCAGCTACAACAGAATCATGGGAACTTTCTAATTGGTCTCACAAGCTTAAGACTATCAACAATCATCTTCGCAAGACCCTGACTAACATGTATAAGCTCATAGGTGAGAAAAGAGATAATGAGTCTTATAAAATGATCAAGACCACTATATATAATATGATGCATATGGACAACATGAAGGTCTTGAAGGTCCTCATATATGCAAAGGATGATGTGCCTCCACTTTATGATTGTTCGGCAAAGAAAAGGGTGCATCTTGAAGTACTTAGGAGGAAAAATGTGTTACTACTCATATCAGATCTGGAAATCAGTCATGACGAACTCTACATTCTGGTACAAAGCTACACTGAATCAAAGATGCATTCGTACGAGATCGTATGGATATCTGTCGTTGATCGTTCAATCGAATGGAGCGATGCAATGCAATCGAAACTCGAGACATTGCAGGCTTCAATGCCTTGGCACTCAGTATACCATCCATCAATAATTGACAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_266391.p1 GENE.R_Transcript_266391~~R_Transcript_266391.p1 ORF type:3prime_partial len:287 (+),score=30.71,SEO_N|PF14576.2|3.7e-60 R_Transcript_266391:85-858(+)
MAVVKRLPMVVEQYPESFKPQHDAINNLIMAMLEVTSCIVEFGELPSIYVTDEDPQVKIALSHFPIAVYWIVRSVVSAASQITTLSRVGLEYVAATTESWELSNWSHKLKTINNHLRKTLTNMYKLIGEKRDNESYKMIKTTIYNMMHMDNMKVLKVLIYAKDDVPPLYDCSAKKRVHLEVLRRKNVLLLISDLEISHDELYILVQSYTESKMHSYEIVWISVVDRSIEWSDAMQSKLETLQASMPWHSVYHPSIIDN

Click here to download the sequence:
Link to NCBI Protein BLAST