Transcript Information: R_Transcript_267338.p1


Annotated TAIR IDAT2G03820.1
Annotated Gene Namenonsense-mediated mRNA decay NMD3 family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:1165149-1166699 | Reverse length=516
E-Value1E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.65579500436115
Replicate 21.5087161975783
Replicate 30.82299656034081
Condition 2: 8 Hour
Replicate 10.58648778316755
Replicate 22.008462440825
Replicate 30.97823051247594
Condition 3: 24 Hour
Replicate 10.54988759826836
Replicate 20.66033709253225
Replicate 31.1795768992939


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_267338.p1 GENE.R_Transcript_267338~~R_Transcript_267338.p1 ORF type:5prime_partial len:167 (+),score=43.07 R_Transcript_267338:1-501(+)
GTTTCAGCTGAGGTTAATGTTGCCGGTTCAAGATACGCGTTGGCTGATCTCCAAGTGGCTCGTGTATCAGATTTTGGAAAGAACAACACAATATTCTTCGTTAGGAAACACTTGGGTCATCTTCTAAGTCCAGGGGATTATGCCCTCGGTTATGATCTCTATGGGGCTAACTTCAATGACTCTGAGTTGGACAAATACAGAGGCCTTGTTCTTACTGAAACAATCTTGATCAAGAAGAGCTATGAGAAGCATCGAAGAAAACATGGGAAGCCCCGTGCTTGGAAACTCATGCCCATTGACAGGGAGGTGGATAATGCTGCTAGAGATAAGATGGATAATGAATACGAAGAATTCTTGAGAGAGCTGGAGGAAAATCCTGAATTGACGTTCAATATATCATTGTATCGCAACAAGGAGCATCAGTATCAGCAATCAGAATCTGCATATATGGCTGATGGCGATGAGCTGCCTTTGGATGAGCTGCTTGCTGTTCTGATTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_267338.p1 GENE.R_Transcript_267338~~R_Transcript_267338.p1 ORF type:5prime_partial len:167 (+),score=43.07 R_Transcript_267338:1-501(+)
VSAEVNVAGSRYALADLQVARVSDFGKNNTIFFVRKHLGHLLSPGDYALGYDLYGANFNDSELDKYRGLVLTETILIKKSYEKHRRKHGKPRAWKLMPIDREVDNAARDKMDNEYEEFLRELEENPELTFNISLYRNKEHQYQQSESAYMADGDELPLDELLAVLI*

Click here to download the sequence:
Link to NCBI Protein BLAST