Transcript Information: R_Transcript_268105.p1


Annotated TAIR IDAT5G28780.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10812907-10814173 | Reverse length=337
E-Value0.0003
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2277235810877
Replicate 21.4052642010908
Replicate 31.9840481382494
Condition 2: 8 Hour
Replicate 12.3136250343854
Replicate 22.0248042612097
Replicate 32.5012061878486
Condition 3: 24 Hour
Replicate 12.2596266956402
Replicate 21.3893076466505
Replicate 32.1543016424111


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_268105.p1 GENE.R_Transcript_268105~~R_Transcript_268105.p1 ORF type:3prime_partial len:254 (+),score=-0.36,PIF1|PF05970.10|1.2e-08 R_Transcript_268105:52-810(+)
ATGCTTGTGAAAGAATCATTATTGAGTAGGGGGGTCATAAGTTACGAGTTTCATTTTTTTTTTTTTTTCTTCTTACTGGTGCTTGTGAGTGATATATGGGCTGGTGTAAGTGTACTGAATTGTTCTTATTGTTTACTTTTGCTTGGCTTGGTGGTGTGTTGTCGGACATCCTATTTTTCCGGTCTTAAGCTTTGCTTTTCTTCTTCGTTCCTTGGCTTGATTAGAGCTTCCTTTGTTTTAAAAGGAGGAATGAGCCCACATTGTCTAAGTTCAAAGCTTAACTGTCCTGTCATCTTGCTTCGCAATCTAAACCCCTCTGTCGGCCTTTGCAATGGAACTAGGCTTATTTGTCGGGGATTTAAGACAAACCTGGTTATTTGTGAGATAGCAACAAGATATCGTGCTGGTGATGTTCAGGATATGAGCTTTTTGGGCAGCCATAGAATCTTTACACCCACTCTCTTTTTTTTTTTTTTTTTTGGGTTTTGTATCTGCACTGCCAACTTAATTTACAACCTTTTGATGTGTCATGTCTCTGTTCAACCTGTACATGACATTTACATTTTTGGATGTGATCATGAATTCCTATATCCAGTTCAGGACACTTTGTTATTATATATGCATAACATAACAATAGCTTTTCATAAGTATTGTTTAATGCTTAAGGCGAATGCAATGCGTTCAAACCATTCTGTCACTGAGCAGCGTAGGAGGAGCAAGATTAATGAAGCCCTACGTAATCAATCTCTTATGTCCAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_268105.p1 GENE.R_Transcript_268105~~R_Transcript_268105.p1 ORF type:3prime_partial len:254 (+),score=-0.36,PIF1|PF05970.10|1.2e-08 R_Transcript_268105:52-810(+)
MLVKESLLSRGVISYEFHFFFFFFLLVLVSDIWAGVSVLNCSYCLLLLGLVVCCRTSYFSGLKLCFSSSFLGLIRASFVLKGGMSPHCLSSKLNCPVILLRNLNPSVGLCNGTRLICRGFKTNLVICEIATRYRAGDVQDMSFLGSHRIFTPTLFFFFFFGFCICTANLIYNLLMCHVSVQPVHDIYIFGCDHEFLYPVQDTLLLYMHNITIAFHKYCLMLKANAMRSNHSVTEQRRRSKINEALRNQSLMSN

Click here to download the sequence:
Link to NCBI Protein BLAST