Transcript Information: R_Transcript_268546.p1


Annotated TAIR IDAT1G74600.1
Annotated Gene Namepentatricopeptide (PPR) repeat-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28025153-28027840 | Reverse length=895
E-Value6.4e-318
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.59276132999647
Replicate 20.25863303984242
Replicate 30.30781730252389
Condition 2: 8 Hour
Replicate 10.32903737891035
Replicate 20.42568308096322
Replicate 30.50816379116425
Condition 3: 24 Hour
Replicate 10.43704672213994
Replicate 20.37046907430981
Replicate 30.73530922800327


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_268546.p1 GENE.R_Transcript_268546~~R_Transcript_268546.p1 ORF type:complete len:893 (+),score=151.92,PPR_2|PF13041.2|0.095,PPR_2|PF13041.2|7.5e-09,PPR_2|PF13041.2|95,PPR_2|PF13041.2|4.4e-12,PPR_2|PF13041.2|17,PPR_2|PF13041.2|6.2e-13,PPR_2|PF13041.2|1.6e+04,PPR_2|PF13041.2|3.9e-06,PPR_2|PF13041.2|6.2e+03,PPR_2|PF13041.2|1.2e-07,PPR_2|PF13041.2|40,PPR_2|PF13041.2|0.00025,PPR_2|PF13041.2|1.1e+02,PPR_2|PF13041.2|1.6e-09,PPR_2|PF13041.2|60,PPR_2|PF13041.2|1.4,PPR_2|PF13041.2|1e+02,PPR|PF01535.16|0.89,PPR|PF01535.16|0.00049,PPR|PF01535.16|1.1e+02,PPR|PF01535.16|0.29,PPR|PF01535.16|8.9e-06,PPR|PF01535.16|1.8,PPR|PF01535.16|2.6e-07,PPR|PF01535.16|4e+03,PPR|PF01535.16|2.7e+02,PPR|PF01535.16|4.5e-06,PPR|PF01535.16|16,PPR|PF01535.16|7.7e-05,PPR|PF01535.16|1.4,PPR|PF01535.16|0.00029,PPR|PF01535.16|0.68,PPR|PF01535.16|6.9e-06,PPR|PF01535.16|36,PPR|PF01535.16|0.047,PPR|PF01535.16|6.2e+02,PPR|PF01535.16|13,PPR_1|PF12854.3|8.5,PPR_1|PF12854.3|8.9,PPR_1|PF12854.3|73,PPR_1|PF12854.3|2,PPR_1|PF12854.3|0.0001,PPR_1|PF12854.3|3.4e+03,PPR_1|PF12854.3|30,PPR_1|PF12854.3|0.00053,PPR_1|PF12854.3|1.4e+03,PPR_1|PF12854.3|0.0079,PPR_1|PF12854.3|0.00064,PPR_1|PF12854.3|0.22,PPR_1|PF12854.3|0.057,PPR_1|PF12854.3|3e+03,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|4e+02,PPR_1|PF12854.3|0.002,PPR_3|PF13812.2|2.2e+03,PPR_3|PF13812.2|4.5e+03,PPR_3|PF13812.2|2.7e+03,PPR_3|PF13812.2|3.3e+02,PPR_3|PF13812.2|6.5e-05,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|83,PPR_3|PF13812.2|1.9,PPR_3|PF13812.2|17,PPR_3|PF13812.2|2.5e+02,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|7.6e+03,PPR_3|PF13812.2|0.072,PPR_3|PF13812.2|72,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|11,PPR_3|PF13812.2|0.29,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|74 R_Transcript_268546:79-2757(+)
ATGAAAGCACTAATTCAACATCTACCTCACCTTAAAAGATCACATTTTTCATGCAAATTTATCACCTCACTTTCTGTACTTGAAAACCCACCAAATTCCCCCTATTATCCATCTCTTAATCATATTGACCCACATCAGATTTTTGCTCAATGTAACAAATCAAAGGTCCTTACAATCATAAATGCCCAAATTATTCATGCCCATCTGATAAAATCAGCTAATTTATTCTCAGATGTGTTCTTGGCAAATTCTTTGCTTGGTTGGTACTGGAAACTCTCTGCCATTGATGATGCACTCCACCTGTTTGATGAAATGCCTAGCCCAAATTTCGTTTCTTGGAATGTAATGATCTCGGGTCATAATCTTAATTGCTTGTATGATGGTGCTTGGAGGTATTTTTTTCGGATGCACTCGATGGGTTGTGTTAGTAATCAATACACTTATGGGAGTGTCATCTCAGCTTGTAGTGGTTTAGGGTCTTTGTTGTATGGGAAGTTGGTTTACTCACTTTCATTGAAGGATGGGTTCTTTTCTAATGGGTATGTTCGTTCTGGGATGATTGATCTTTTTGCCAAAAATGGTCGCCTTGACGATGGCTTGCGGGTGTTTTATGATTGGCCACATGAAGAGAATGTAGTTTGTTGGAATAGTATGATATCTGGGGCTGTGAAAAGTGGGGACAATGGGAGAGCTTTAGAGCTATTTGATCACATGCGTCGTGCTTCTGTTCTTCCTAATAGTTTTACGTTTTCTGGTGTTTTGACGGCATGTGTTGCACTTGAAGATGATGATATGGGTAAGAAGGTACATGGGTTGGTGATCAAACATGGTGCAGGGCAAGATGTCTTTATAGGCACCAGTATTGTTGACCTGTATGCCAAATGTGGAGATATGAACGAAGCCACTAAGAACTTTTTGAGGATGCTGGTACTTAATGTGGTGTCGTGGACTGCTATGATTACTGGTTATGTGCAAAAAGATGATGTTATTTCTGCTGTTAAGTTATTCAGACAAATGAGAAGTATGGGGGTTGAAGTGAACAATTATACTATTACTAGTGTACTTCGTGCATGTGCTAAGCCAGACATGATTGATGTAGCATTGCAAATACATTCATGGATTCTAAAATCCGGGTTCTGTATTGATCCAACAGTGAGAGCTTCTTTAATTAATACATACTCAAAAGCAGGAGAAGTAGCTTTATCTGAATTACTGTATATAGAACAGCAAAACTCAAAAGACCTAGATTTGTGGAATGTCTTGATCTCTTCCTTTGCTCAGAACCGTATGCTAAGAAAGGCAACTGAATTGTTCCATAAAATGTTGCTGGAAGGTCTGAAACCAGATAGTTTTCCCATATCTAGCATTTTGAGCATCATAGATCGCCTAGATGTTGGGAGGCAGATTCACTCCTACACTCTCAAATCTGGATTGATCTTCGACATCAGAGTCGGTAGCGCACTTTTTACAATGTACTCAAAATGCGGGTCTCTGTCAGAATCTTATGAAGTATTCTTGCAGCTTCCTTATAAAGACGTTGTTTCATGGGCCTCTATGATTTCTGGTTTCGCTGAGCATGGCTATGCTGAAAGAGCTATCCTGTTGTTCAGAGAGATGCTGCATATGGATGAAAAGCCTGATCAAATGACACTTATCGGACTCTTGTCTGCTTGTTCGTCTTTTGTGACCCCATTAAAAGGCAAGGAAGTTCATGGTTATGCTTTTCGTGCAGGGATTAGCAGAGAAAGCCTCATTGGTGGTGCACTTGTAAATATGTATTGCAAATGTGGTTCTATAGGTTCTGCAAGGAGGGTGTTTGACATGATTTATCATAAAGATGAAGTTGCATGCTCGGCTTTAGTTTCAGGCTATTCTCAGCAGGGATGCATTGAAGAGGCAATGTTGGTGCTTCATGAAATGCTTGTGGCTGATCTGGTAGTTGACTCTTTTACGTTATCATCTATTCTCGGTTCTGATGCTCTTTTTAATAGAACTGATATTGGCATTCAGTTGCATGCACTTGTGGTAAAATTAAGCTTGCAGTCTGATGTTTCTGTTGGTAGTTCACTGATTAAAATGTACTCGAAATGGGGAGTCATTGATGATTGTCGTAAAGTTTTTGATCAGATAATGGAACCTGATTTGATCAGTTGGACGACAATGATTTTGAGCTACGCACAACATGGGGAAGGTACAGAGGCCTTGAAACTTTATGAAGCTATGAAAAGTGTGGGTACCAAACCTGACGCTGTGACATTTGTTGGTGTGTTAACCGCCTGTAGCCATAATGGCTTGGTGGAAGATGGTTATTTTCATCTGCATTCCATGTCTAAAGACTATGGAATCAAACCTAGCAACCGTCACTATGCATGTATGGTTGATCTTCTTGGTCGCTCTGGAAGACTAAAAGAAGCAGAAAGGCTTATCGGGGACATGCCTGTTAAGGCTGATGCTTTAATATGGGGAACTTTGTTGGCTGCTTGCAAAGTACATGGAGATGTTGAACTAGGAAGGCTAGCAGCCAAAAAGGTTTTTGATTTAGAGCCTTCTGATCCTGGAGCTTACATATCCTTGTCCAATATCTTTGCAGATATGGGGCAATGGGAAGAAGTCGAGGAGATAAGAAGTGTAATGAAGGATACTGGATTGAGCAAGGAGCCTGGCTGGAGTCATGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_268546.p1 GENE.R_Transcript_268546~~R_Transcript_268546.p1 ORF type:complete len:893 (+),score=151.92,PPR_2|PF13041.2|0.095,PPR_2|PF13041.2|7.5e-09,PPR_2|PF13041.2|95,PPR_2|PF13041.2|4.4e-12,PPR_2|PF13041.2|17,PPR_2|PF13041.2|6.2e-13,PPR_2|PF13041.2|1.6e+04,PPR_2|PF13041.2|3.9e-06,PPR_2|PF13041.2|6.2e+03,PPR_2|PF13041.2|1.2e-07,PPR_2|PF13041.2|40,PPR_2|PF13041.2|0.00025,PPR_2|PF13041.2|1.1e+02,PPR_2|PF13041.2|1.6e-09,PPR_2|PF13041.2|60,PPR_2|PF13041.2|1.4,PPR_2|PF13041.2|1e+02,PPR|PF01535.16|0.89,PPR|PF01535.16|0.00049,PPR|PF01535.16|1.1e+02,PPR|PF01535.16|0.29,PPR|PF01535.16|8.9e-06,PPR|PF01535.16|1.8,PPR|PF01535.16|2.6e-07,PPR|PF01535.16|4e+03,PPR|PF01535.16|2.7e+02,PPR|PF01535.16|4.5e-06,PPR|PF01535.16|16,PPR|PF01535.16|7.7e-05,PPR|PF01535.16|1.4,PPR|PF01535.16|0.00029,PPR|PF01535.16|0.68,PPR|PF01535.16|6.9e-06,PPR|PF01535.16|36,PPR|PF01535.16|0.047,PPR|PF01535.16|6.2e+02,PPR|PF01535.16|13,PPR_1|PF12854.3|8.5,PPR_1|PF12854.3|8.9,PPR_1|PF12854.3|73,PPR_1|PF12854.3|2,PPR_1|PF12854.3|0.0001,PPR_1|PF12854.3|3.4e+03,PPR_1|PF12854.3|30,PPR_1|PF12854.3|0.00053,PPR_1|PF12854.3|1.4e+03,PPR_1|PF12854.3|0.0079,PPR_1|PF12854.3|0.00064,PPR_1|PF12854.3|0.22,PPR_1|PF12854.3|0.057,PPR_1|PF12854.3|3e+03,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|4e+02,PPR_1|PF12854.3|0.002,PPR_3|PF13812.2|2.2e+03,PPR_3|PF13812.2|4.5e+03,PPR_3|PF13812.2|2.7e+03,PPR_3|PF13812.2|3.3e+02,PPR_3|PF13812.2|6.5e-05,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|83,PPR_3|PF13812.2|1.9,PPR_3|PF13812.2|17,PPR_3|PF13812.2|2.5e+02,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|7.6e+03,PPR_3|PF13812.2|0.072,PPR_3|PF13812.2|72,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|11,PPR_3|PF13812.2|0.29,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|74 R_Transcript_268546:79-2757(+)
MKALIQHLPHLKRSHFSCKFITSLSVLENPPNSPYYPSLNHIDPHQIFAQCNKSKVLTIINAQIIHAHLIKSANLFSDVFLANSLLGWYWKLSAIDDALHLFDEMPSPNFVSWNVMISGHNLNCLYDGAWRYFFRMHSMGCVSNQYTYGSVISACSGLGSLLYGKLVYSLSLKDGFFSNGYVRSGMIDLFAKNGRLDDGLRVFYDWPHEENVVCWNSMISGAVKSGDNGRALELFDHMRRASVLPNSFTFSGVLTACVALEDDDMGKKVHGLVIKHGAGQDVFIGTSIVDLYAKCGDMNEATKNFLRMLVLNVVSWTAMITGYVQKDDVISAVKLFRQMRSMGVEVNNYTITSVLRACAKPDMIDVALQIHSWILKSGFCIDPTVRASLINTYSKAGEVALSELLYIEQQNSKDLDLWNVLISSFAQNRMLRKATELFHKMLLEGLKPDSFPISSILSIIDRLDVGRQIHSYTLKSGLIFDIRVGSALFTMYSKCGSLSESYEVFLQLPYKDVVSWASMISGFAEHGYAERAILLFREMLHMDEKPDQMTLIGLLSACSSFVTPLKGKEVHGYAFRAGISRESLIGGALVNMYCKCGSIGSARRVFDMIYHKDEVACSALVSGYSQQGCIEEAMLVLHEMLVADLVVDSFTLSSILGSDALFNRTDIGIQLHALVVKLSLQSDVSVGSSLIKMYSKWGVIDDCRKVFDQIMEPDLISWTTMILSYAQHGEGTEALKLYEAMKSVGTKPDAVTFVGVLTACSHNGLVEDGYFHLHSMSKDYGIKPSNRHYACMVDLLGRSGRLKEAERLIGDMPVKADALIWGTLLAACKVHGDVELGRLAAKKVFDLEPSDPGAYISLSNIFADMGQWEEVEEIRSVMKDTGLSKEPGWSHA*

Click here to download the sequence:
Link to NCBI Protein BLAST