Transcript Information: R_Transcript_268639.p1


Annotated TAIR IDAT3G16280.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5518355-5519065 | Forward length=236
E-Value6.6E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.12168640636479
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.1632390996483
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.45915614455408
Replicate 20.29407011854103
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_268639.p1 GENE.R_Transcript_268639~~R_Transcript_268639.p1 ORF type:3prime_partial len:150 (+),score=30.19,AP2|PF00847.16|8.5e+03,AP2|PF00847.16|1.9e-13,AP2|PF00847.16|1.6e+04 R_Transcript_268639:61-507(+)
ATGAGCTCAAACAACAAGACATCTAATTCCAGAAGCAAGAAGAAATCAATCAGTGATAAAGATGACGACAATGCCCATGATGATGAGCATGAGCATCCAATTTATAGAGGGGTAAGAAAAAGAAGTTGGGGAAAATGGGTATCAGAAATCCGAGAGCCAAGGAAAAAGTCTAGAATATGGCTAGGTACGTATGCAACGGCTGAGATGGCAGCTCGAGCTCATGACGTGGCGGCTTTAGCCATCAAGGGTCCTAATGCTTTCCTCAACTTTCCTCAACTTTCTCATTTGCTCCCTCGTCCTGCTTCCACGTGTCCCAAGGACATCCAAGCCGCCGCTGCTAAGGCGGCTGAAGCCGAGCCGACCCAGATCATCACTAGCTGCACTAGCTCCACTTCCACCTCCTCGGAAACCGCCACTGATTGGTGGAACTCTGTGGGGTCCACTGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_268639.p1 GENE.R_Transcript_268639~~R_Transcript_268639.p1 ORF type:3prime_partial len:150 (+),score=30.19,AP2|PF00847.16|8.5e+03,AP2|PF00847.16|1.9e-13,AP2|PF00847.16|1.6e+04 R_Transcript_268639:61-507(+)
MSSNNKTSNSRSKKKSISDKDDDNAHDDEHEHPIYRGVRKRSWGKWVSEIREPRKKSRIWLGTYATAEMAARAHDVAALAIKGPNAFLNFPQLSHLLPRPASTCPKDIQAAAAKAAEAEPTQIITSCTSSTSTSSETATDWWNSVGSTG

Click here to download the sequence:
Link to NCBI Protein BLAST