Transcript Information: R_Transcript_268703.p1


Annotated TAIR IDAT5G48330.1
Annotated Gene NameRegulator of chromosome condensation (RCC1) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19585989-19587729 | Forward length=455
E-Value1.1E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8731512613909
Replicate 23.0133579301168
Replicate 33.4996404660788
Condition 2: 8 Hour
Replicate 14.0809774912075
Replicate 24.7620396513636
Replicate 33.6975503115603
Condition 3: 24 Hour
Replicate 13.6137289154719
Replicate 22.6547996812732
Replicate 33.8506147134356


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_268703.p1 GENE.R_Transcript_268703~~R_Transcript_268703.p1 ORF type:3prime_partial len:216 (-),score=42.74,RCC1|PF00415.14|7.9e+02,RCC1|PF00415.14|0.6,RCC1|PF00415.14|4.9e-05,RCC1|PF00415.14|1,RCC1|PF00415.14|0.0012,RCC1_2|PF13540.2|0.00023,RCC1_2|PF13540.2|1.3e+02,RCC1_2|PF13540.2|2.4e-05 R_Transcript_268703:1-552(-)
ATGAATACTAATGAGGCCCTACAAGTTGCTGAGAAGCTCGTCTTAGAAAGCATGGACAAGGAAAAGGACATGCCAATTGCCTGGGAACCTTACTCAATAGATGAAGTGCAGTCCATTGCAGTGACTGATGTTTCGTGTGGCCTTGATCATTCTTTAATCATTTGCCGTGATGGCACCACGCTAAGTGGTGGGAGTGACACATATGGTCAGTTGGGAAGAGAGAAACAAGATATAGGCCTTTTTCCCGTTGACATAGACTTTTGTCCATCGTCTATTGCCTGTGGGCTCGGACATTCCATAGCGATCTGTACAATGCCAGCTTCAGACATTGACAATGATCCTAGAAAAGTCACTGTCTCTTGGGGCTGGAACCAGTGCTCTCAGCTAGGAAGAGCAGGGCCAGAGAGCAAAGCTTTGGTGGTGGAAGGTTTGATTGAGGAGATACCGGCAGCACTTTCTGCTGGTCGTGTGCATTCACTTTGTGTCACTGCAAACGGGGAGCTGTGGTCTTGGGGCTGTGGTAAAAATGGTAGGCTTGGTTTAGGCTGCTCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_268703.p1 GENE.R_Transcript_268703~~R_Transcript_268703.p1 ORF type:3prime_partial len:216 (-),score=42.74,RCC1|PF00415.14|7.9e+02,RCC1|PF00415.14|0.6,RCC1|PF00415.14|4.9e-05,RCC1|PF00415.14|1,RCC1|PF00415.14|0.0012,RCC1_2|PF13540.2|0.00023,RCC1_2|PF13540.2|1.3e+02,RCC1_2|PF13540.2|2.4e-05 R_Transcript_268703:1-552(-)
MNTNEALQVAEKLVLESMDKEKDMPIAWEPYSIDEVQSIAVTDVSCGLDHSLIICRDGTTLSGGSDTYGQLGREKQDIGLFPVDIDFCPSSIACGLGHSIAICTMPASDIDNDPRKVTVSWGWNQCSQLGRAGPESKALVVEGLIEEIPAALSAGRVHSLCVTANGELWSWGCGKNGRLGLGCS

Click here to download the sequence:
Link to NCBI Protein BLAST