Transcript Information: R_Transcript_268774.p1


Annotated TAIR IDAT1G09280.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G40760.1); Has 5925 Blast hits to 5912 proteins in 1592 species: Archae - 0; Bacteria - 2946; Metazoa - 156; Fungi - 408; Plants - 229; Viruses - 0; Other Eukaryotes - 2186 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:2998209-3001253 | Reverse length=581
E-Value1.1E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.86918861689137
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.30422968491409
Replicate 31.2348034435637
Condition 3: 24 Hour
Replicate 10.93705335623282
Replicate 20.30007154953166
Replicate 30.148895950251


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_268774.p1 GENE.R_Transcript_268774~~R_Transcript_268774.p1 ORF type:internal len:147 (-),score=23.43,Rhodanese_C|PF12368.4|4.1e-15 R_Transcript_268774:1-438(-)
CAGTTGTATGGCGGGATACAGCGATATCTAGAACAGTTTCCAGATGGTGGCTTCTTCAAGGGGAAGAATTTTGTGTATGATCACCGGATCTCTGTTGGGAGTTCAAACGAATTGATTATGGGTAAATGCCTTCTTTGTGGAGTCTCTTTTGATGATTACTCATCTCGCTGCCGTTGTACCTTTTGTCGCATGCTTGTTTTGGTCTGCAATGATTGTCAGAAGGAGAGTCAACAATATGTGTGTGAGTTGTGCCAGAATCATGGTAAAGTTATCCAGTGTGCTCCTTCAGCTAATGTTGATAGTCCAGAAACAACTCTGGCATGTGATATTGCAGCAGTCCCGAATGGATCCCCTTGCCATCTTAGCACAAGCCAAATTCAAGTTTCCTGCAGTCCTGGAAAAATTACACTGAGACTGAGGTACCCTGAACTATGGCCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_268774.p1 GENE.R_Transcript_268774~~R_Transcript_268774.p1 ORF type:internal len:147 (-),score=23.43,Rhodanese_C|PF12368.4|4.1e-15 R_Transcript_268774:1-438(-)
QLYGGIQRYLEQFPDGGFFKGKNFVYDHRISVGSSNELIMGKCLLCGVSFDDYSSRCRCTFCRMLVLVCNDCQKESQQYVCELCQNHGKVIQCAPSANVDSPETTLACDIAAVPNGSPCHLSTSQIQVSCSPGKITLRLRYPELWP

Click here to download the sequence:
Link to NCBI Protein BLAST