Transcript Information: R_Transcript_268966.p1


Annotated TAIR IDAT2G46900.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Basic helix-loop-helix, Nulp1-type (InterPro:IPR006994); Has 2929 Blast hits to 2464 proteins in 333 species: Archae - 2; Bacteria - 151; Metazoa - 913; Fungi - 372; Plants - 141; Viruses - 47; Other Eukaryotes - 1303 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:19269678-19271987 | Forward length=627
E-Value2E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4934240781134
Replicate 20.38175091665997
Replicate 31.4577014833915
Condition 2: 8 Hour
Replicate 12.0033889502292
Replicate 22.2360881841186
Replicate 30.66005856801407
Condition 3: 24 Hour
Replicate 11.8783660459031
Replicate 20.60150706065211
Replicate 32.387749602207


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_268966.p1 GENE.R_Transcript_268966~~R_Transcript_268966.p1 ORF type:internal len:110 (+),score=16.28 R_Transcript_268966:1-327(+)
GTGATAGAATCATTGAAGCATAATGCAAATGAGGCCAATACTTGGGCTTGTGTAAGAAAAGAAGCATTTCCCTCGGAGAAGAATGATTATGGACATTTGCTGGTTTCAGATTTCTCTGATAGAGTGCCAACTATGCCACCAGATAACCTGCAAAATTTTATGATGGTAGATCCGAGGATGAGAGATATGGTGGAGAATCAGAACCAAGGCGCCAATGCAAGGGCCCCACATGACTTGGCCGGTCGAAGTCCCTGGGCTTTTTTTTTTGAAACAATGTTCCCCTGGGAACACGTAGATAATGAAGCCGACAATGGCGGCCAACACAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_268966.p1 GENE.R_Transcript_268966~~R_Transcript_268966.p1 ORF type:internal len:110 (+),score=16.28 R_Transcript_268966:1-327(+)
VIESLKHNANEANTWACVRKEAFPSEKNDYGHLLVSDFSDRVPTMPPDNLQNFMMVDPRMRDMVENQNQGANARAPHDLAGRSPWAFFFETMFPWEHVDNEADNGGQHN

Click here to download the sequence:
Link to NCBI Protein BLAST