Transcript Information: R_Transcript_269053.p1


Annotated TAIR IDAT5G52300.1
Annotated Gene NameCAP160 protein
Annotated Gene Symbol(s)RD29B, LTI65
Annotation TypeHomolog
Chromosome Positionchr5:21237205-21239404 | Forward length=619
E-Value3E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.11274292310799
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_269053.p1 GENE.R_Transcript_269053~~R_Transcript_269053.p1 ORF type:complete len:483 (-),score=121.19,CAP160|PF07918.7|3.2e-06 R_Transcript_269053:391-1839(-)
ATGGGAGAAAGAATTCCAACTGAAGAGGTGACTGATATGCCTGAGAGAACTCCTGGTAGTCATCAGACCCATGATCCTGCTACAGCGGGATATATTCCAGGCACCCGTTTGCCAATAAGTGCTCCTGCTAGTGCTGCTGGTAGTGCTCCTGTTGCTGAATATCAGACATTTGATCCTACTAGTGTTAGCTACACTCCTGGGGATGAAGAGACTCTAGGCCGATCTAGAACCGATACAGGAGGGCCAAGATCTGATGAACGACATCACCATGCTGGGCCTGTTGATTTTCTTGGCACGAGGGAACAAGATGCCAAATTCCCGATGGGGTCCGAGGAACAGTTTTTCACATCGAGCATGCCTGTTGCTGCTACTTCGGGTGGAGTTCAAGGTGCTGGGCTTGACCTTGACAGTGTTCTTGGCACTGGAGAAACAGATATGCCAGATACTAGAAGGCCAGTAGGTTTCAAGGAACAACCGTATGCATCGAAAAACATGCCTGCTGCGGCCCTTTCTGGCGGAGTTCATGGTGGTGGGTTTGACAGCGCTCTTCGCACTGGGGAACAAGATGCTCGAAGGCTGGCAAGGTCTGACGGCACGCCTGTTGGTGCCCATTCTGGTGGACTTCATGGTGCCGGGCATGACAGTATTCTCAGCATGGAGTCAGATACTAGAAGGGAGGAACGACCCTATGCACCTAAGAACACACCTGTCAATGTGCACTCTGATGGAGCCCACACTGCCAGTGTTCTTGGCACGGAAGGACTAGGTACAAGGATGGCAATTGGGTCTCAGGAACGACCCTATGAAGCTCATTCTGGTGGAGCTCATGGTGCCGATATCCTTGAAAGGGGTCATCAAGGATTTTCAGGAGAGATTGGGGGCGTAATTGAGAGAGCAGGAGACCTTCAAAAAGATCCTCATGCTCCAAAGGATCAAGGGGAAGCGCTTGATCCTGGAAATTACCAAACAAAGACCACAGACTCGACAGGCATTGATGCTCAAGAAGTATGTGTTACTCCGCTCCTGCATCATTTAGACATGATGAGAATCCATGAAGAATCAGACAAAAAATCAAGCACAGGCCAAGAAGGGACCCTGTTTAAACCAAGCCTAGGTCATGATCTCCCCACTTCAACTGGAGCATCAGATGAAAAACTATTCACAGGAAGCCATGATCAATTCTCCCCTGAGCCAATCACTCCTGAAACCAGCACTTTCCTTCAAGAACCCGAAACCCAGGCCCTTGGTGCCAATCGACCATGTGATCAGGGGTCACACGAGGAAGAGAAGAAACAAGGGAGCTACACTGAGAAGGTGTCGTCAGCGGCCTCAATGGTGGCTGACAAAGCAAAGCAGGCCACGACAGCTGTTACGTCAAAGCTTGCATACGGTGGTGCCAGTACTGACCAGTCACCTACAGAATCCACAGAAGGACATGATCTGAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_269053.p1 GENE.R_Transcript_269053~~R_Transcript_269053.p1 ORF type:complete len:483 (-),score=121.19,CAP160|PF07918.7|3.2e-06 R_Transcript_269053:391-1839(-)
MGERIPTEEVTDMPERTPGSHQTHDPATAGYIPGTRLPISAPASAAGSAPVAEYQTFDPTSVSYTPGDEETLGRSRTDTGGPRSDERHHHAGPVDFLGTREQDAKFPMGSEEQFFTSSMPVAATSGGVQGAGLDLDSVLGTGETDMPDTRRPVGFKEQPYASKNMPAAALSGGVHGGGFDSALRTGEQDARRLARSDGTPVGAHSGGLHGAGHDSILSMESDTRREERPYAPKNTPVNVHSDGAHTASVLGTEGLGTRMAIGSQERPYEAHSGGAHGADILERGHQGFSGEIGGVIERAGDLQKDPHAPKDQGEALDPGNYQTKTTDSTGIDAQEVCVTPLLHHLDMMRIHEESDKKSSTGQEGTLFKPSLGHDLPTSTGASDEKLFTGSHDQFSPEPITPETSTFLQEPETQALGANRPCDQGSHEEEKKQGSYTEKVSSAASMVADKAKQATTAVTSKLAYGGASTDQSPTESTEGHDLR*

Click here to download the sequence:
Link to NCBI Protein BLAST