Transcript Information: R_Transcript_269158.p1


Annotated TAIR IDAT1G48310.1
Annotated Gene Namechromatin remodeling factor18
Annotated Gene Symbol(s)CHR18, CHA18
Annotation TypeOrtholog
Chromosome Positionchr1:17848620-17853731 | Reverse length=673
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5571204136507
Replicate 23.6736059049853
Replicate 33.0955050805611
Condition 2: 8 Hour
Replicate 13.2740701351935
Replicate 23.6897045427845
Replicate 34.0021332093314
Condition 3: 24 Hour
Replicate 13.9188291142596
Replicate 22.9490673338752
Replicate 34.6079378288205


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_269158.p1 GENE.R_Transcript_269158~~R_Transcript_269158.p1 ORF type:complete len:703 (+),score=143.46,SNF2_N|PF00176.19|4.7e-30,Helicase_C|PF00271.27|2e+03,Helicase_C|PF00271.27|1.3e-16 R_Transcript_269158:146-2254(+)
ATGGAGCTAGACGATGAATGGGGTTTAAGTGCTGAAGAACTCGATTCTCTCGAACAAGAAGCTTTTCGCCAAATTGCTCTCCGCAACTCTCAACAACAACAACAACAACAACAGCAGCAGCAGCAGCAACAACAAAAGGGAGATGCTTCTTCGGGATCCAGAGTTTTACCTTCATCCATTGGTTCAGCAAAAGCTAGTGGATCCAGAGTTTTGCCATCGTCCATTGCACCACCAAAAGTCGATGACTTACCTAAACAAGCTCCAAAACGCAATGTCAAGTTCTTTCTTCATGCTAGTGGAAGTATAGCTGCTAGGTTTCCTTATGACCAGGCGCTCATAAATGCTATCAAGAAGATACCAAAAGCCACTTGGAATGCACAAGAAAGGCTATGGTTGTTCCCGCTATCTTCCTTGGCAACCGCTGAAGAAACTCTCAAGAAGACACCTAATTTGAAAATTGAGGTGGAAAATCTGGATCCTCTAGTTCAACGTGCTATCGCTGCGGCAACATCTGTTCCAGATCTTCGAGATCGATATGACAGGATCCCAAGTTATATTGAATCAAAGCTTCTACCATTTCAACGGGACGGTGTGAGGTTTGTGTTGCAGCATGGAGGCCGTGCCCTTGTTGCGGATGAAATGGGTCTGGGTAAGACAATACAGGCAATCGCTGTGGCCACATGTGTACGTGAAGCATGGCCAGTCTTGGTGCTTACACCTTCTTCCTTGCGCTTGCACTGGGCTGCTATGATTCAAGAATGGCTGAACATTCCTCCATCAGATATAGTTGTGGTTTTATCCCAGTGGGGTGGATCAAATAAAGCTGGGTTTTCAGTGGTTTCCACAACCAAGGGGACTGTTCATCTTGATGGTGTGTTCAACATCATTTCCTATGACACTGTAACCAAATTACAAGGGACTCTGATGACATCAGACTTCAAGGTTGTGATTGCAGATGAGTCACACTATTTGAAGAATGCTCAAGCAAAGAGGACCAATGCCTCTCTTCCTGTCCTACAGAAAGCCCAATATGTAATTTTGCTTAGTGGAACCCCTGCTTTGTCGAGGCCTATTGAGCTATTCAAGCAATTAGAATCCCTGTATCCTGATGTATACAAGAATGTCCATGAATATGGCAACCGCTATTGCAGGGGTGGCGCATTTGGATTATATCAAGGTGCAACTAACCATGAAGAATTGCACAATTTAATGAAATCTACACTAATGATACGCAGACTTAAGAAGGATGTTCTTTCTGAGCTTCCTGTAAAACGTAGGCAACAGGTCTTTTTGGATCTGGCTGAAAAGGAATTGAGACCAATCAAAGCATTGTTTCACGAGTTGGGATTAGTGAAAGACAAGATTAAAACTTGCCGGTCTAAGGACGAACTCGACTCTCTCAAATTTTCTGAAAAGGGCCTTATTAATAAGATATTTAATGATTCTGCAGAAGCTAAGATACCAGCAGTCTTGGATTACCTAGGAACAGTAATTGAGGCTGGATGTAAATTTCTTATATTTGCTCACCATCAACCCATGATTGAAGCAATACACCAGTTCCTACAGAAGAAAAAAGTTGGCTGCATACGCATCGATGGTAGTACACCTGCTGCATCAAGACAAACTTTGGTCACAGATTTTCAAGAAAAAGAAGCAATTAAGGCTGCAGTTCTATCCATCAAAGCTGGAGGTGTGGGGTTAACTTTAACAGCTGCAAGCACAGTTATCTTTGCGGAGATGTCTTGGACTCCTGGTGACTTGATACAAGCAGAAGATCGTGCTCATAGAATTGGCCAGGTCACTTCGGTCAATGTCTATTACCTTATAGCAAATGACACAGTTGATGACATCATATGGGATGTTGTTCAAAGCAAACTAGAAAATTTGGGACAGGTTCTTGATGGACAAGAGAATACGATGGATGTTTCAGACAGCCAGCCAAGGCCGAGCCCCACGAAAAGCATCTATTCAAGTCAGAGCCCCACCAAAACTTCAGTCCTGCCAAGACCTAGCCCGACAAAGCAGAAGACACTTGATTCGTACTTGAAACGTTGTAGTAGCTCAGAAGACGCTGATGGTGAACCGAGACTCAAATACCCGAGAAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_269158.p1 GENE.R_Transcript_269158~~R_Transcript_269158.p1 ORF type:complete len:703 (+),score=143.46,SNF2_N|PF00176.19|4.7e-30,Helicase_C|PF00271.27|2e+03,Helicase_C|PF00271.27|1.3e-16 R_Transcript_269158:146-2254(+)
MELDDEWGLSAEELDSLEQEAFRQIALRNSQQQQQQQQQQQQQQQKGDASSGSRVLPSSIGSAKASGSRVLPSSIAPPKVDDLPKQAPKRNVKFFLHASGSIAARFPYDQALINAIKKIPKATWNAQERLWLFPLSSLATAEETLKKTPNLKIEVENLDPLVQRAIAAATSVPDLRDRYDRIPSYIESKLLPFQRDGVRFVLQHGGRALVADEMGLGKTIQAIAVATCVREAWPVLVLTPSSLRLHWAAMIQEWLNIPPSDIVVVLSQWGGSNKAGFSVVSTTKGTVHLDGVFNIISYDTVTKLQGTLMTSDFKVVIADESHYLKNAQAKRTNASLPVLQKAQYVILLSGTPALSRPIELFKQLESLYPDVYKNVHEYGNRYCRGGAFGLYQGATNHEELHNLMKSTLMIRRLKKDVLSELPVKRRQQVFLDLAEKELRPIKALFHELGLVKDKIKTCRSKDELDSLKFSEKGLINKIFNDSAEAKIPAVLDYLGTVIEAGCKFLIFAHHQPMIEAIHQFLQKKKVGCIRIDGSTPAASRQTLVTDFQEKEAIKAAVLSIKAGGVGLTLTAASTVIFAEMSWTPGDLIQAEDRAHRIGQVTSVNVYYLIANDTVDDIIWDVVQSKLENLGQVLDGQENTMDVSDSQPRPSPTKSIYSSQSPTKTSVLPRPSPTKQKTLDSYLKRCSSSEDADGEPRLKYPRN*

Click here to download the sequence:
Link to NCBI Protein BLAST