Transcript Information: R_Transcript_26921.p1


Annotated TAIR IDAT5G53180.1
Annotated Gene Namepolypyrimidine tract-binding protein 2
Annotated Gene Symbol(s)ATPTB2, PTB2
Annotation TypeOrtholog
Chromosome Positionchr5:21568393-21571537 | Reverse length=429
E-Value2.1E-189
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4979633610256
Replicate 21.0210966767804
Replicate 32.0191349248888
Condition 2: 8 Hour
Replicate 11.116376821303
Replicate 20.81559447445054
Replicate 34.0827330878682
Condition 3: 24 Hour
Replicate 12.5818810560032
Replicate 21.8100060487708
Replicate 33.2598709108145


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_26921.p1 GENE.R_Transcript_26921~~R_Transcript_26921.p1 ORF type:complete len:329 (+),score=42.75,RRM_1|PF00076.18|1.6e-07,RRM_1|PF00076.18|0.00098,RRM_1|PF00076.18|0.31,RRM_5|PF13893.2|9.6e-05,RRM_5|PF13893.2|0.00044,RRM_5|PF13893.2|1.2e+04,RRM_5|PF13893.2|0.051,RRM_6|PF14259.2|2.2e-06,RRM_6|PF14259.2|0.24,RRM_6|PF14259.2|14 R_Transcript_26921:646-1632(+)
ATGGCGTCAGTGTCAAGCCAGCCACAGTTCCGATACACCCAACCGCCTTCAAAAGTACTTCATCTGAGAAACTTGCCCTGGGAATGCGCTGAAGAAGAGCTCATTGAACTGGGTAAACCTTTTGGTAAAGTTGTTAATACCAAGTGCAATGTCGGTGCCAATAAGAATCAAGCTTTCATTGAATTTGCGGACCTGAATCAAGCTATTGCAATGATATCCTACTACGCTTCATCCTCAGAGCCTGCTCAAATACGGGGAAAAACTGTTTACTTACAGTATTCCAATAGGCAAGAAATTGTAAACAATAAGACTACTGCTGATACTGCAGGAAATGTGCTGTTGGTGACCATTGAGGGCAATGAAGCTCGCCAAGTCAGTATTGATGTTTTACACTTGGTATTTTCTGCGTTTGGTTTTGTGCATAAAATTACAACTTTTGAGAAGACAGCTGGATTTCAGGCGTTGATTCAGTTTTCTGACACAGAGACTGCGTCTAGTGCAAAGAATGCTTTGGATGGAAGAAGCATCCCAAGGTACCTGCTTCCAGAGCATGTAGGGCCATGCACCCTTAGGATTACGTACTCTGCACATACTGATTTGAGTGTCAAATTTCAGAGCCACCGCAGCAGGGATTACACTAATCCATACCTTCCAGTTGCGCCATCGGCCATAGATGCAACCGGTCAGTTAGGTGTGGGTTTGGACGGCAAAAAATTGGAACCCGAGAGCAATGTCCTCTTGGCATCTATTGAAAATATGCAGTATGCTGTAACATTAGATGTCTTGCACACGGTCTTTTCTGCCTTTGGACTTGTGCAAAAAATTGCCATGTTTGACAAGAATGGAGGAGTGCAGGCGTTGATTCAATACCCTGGTAATTGCAAAATCTTTGTTTTATTTATTTTTATTGTCCTTTTCTTTTTGGAAAAGAGATGCATAAGAAGGAATTTCTGCTTTGACTGGAAGAGAAAGGTGATGTCCCGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_26921.p1 GENE.R_Transcript_26921~~R_Transcript_26921.p1 ORF type:complete len:329 (+),score=42.75,RRM_1|PF00076.18|1.6e-07,RRM_1|PF00076.18|0.00098,RRM_1|PF00076.18|0.31,RRM_5|PF13893.2|9.6e-05,RRM_5|PF13893.2|0.00044,RRM_5|PF13893.2|1.2e+04,RRM_5|PF13893.2|0.051,RRM_6|PF14259.2|2.2e-06,RRM_6|PF14259.2|0.24,RRM_6|PF14259.2|14 R_Transcript_26921:646-1632(+)
MASVSSQPQFRYTQPPSKVLHLRNLPWECAEEELIELGKPFGKVVNTKCNVGANKNQAFIEFADLNQAIAMISYYASSSEPAQIRGKTVYLQYSNRQEIVNNKTTADTAGNVLLVTIEGNEARQVSIDVLHLVFSAFGFVHKITTFEKTAGFQALIQFSDTETASSAKNALDGRSIPRYLLPEHVGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDATGQLGVGLDGKKLEPESNVLLASIENMQYAVTLDVLHTVFSAFGLVQKIAMFDKNGGVQALIQYPGNCKIFVLFIFIVLFFLEKRCIRRNFCFDWKRKVMSR*

Click here to download the sequence:
Link to NCBI Protein BLAST