Transcript Information: R_Transcript_269860.p1


Annotated TAIR IDAT5G05800.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1743234-1744751 | Reverse length=449
E-Value2E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.30421601591198
Replicate 20
Replicate 30.38177895993587
Condition 2: 8 Hour
Replicate 10.20404887456038
Replicate 20.55902204602964
Replicate 30.45379026550967
Condition 3: 24 Hour
Replicate 10.76526024092347
Replicate 20
Replicate 30.72959015622991


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_269860.p1 GENE.R_Transcript_269860~~R_Transcript_269860.p1 ORF type:5prime_partial len:120 (+),score=21.16,Myb_DNA-bind_3|PF12776.3|4.8e-19 R_Transcript_269860:2-361(+)
GAAGGTGGTGGTGAAATAGGGAGACAAGATAATGGAAGAGTTAAGTGGTCAAAAGAATTACTACACATTCTTTGTGATCTTTGTATTCAATATACTGAAAAAAGTAAAGAAAAACGTGGTGAGATTACTTCTCAAAGAATAGAATGGAAAAAAGTTGTTCCTGAATTTCAGAAAAAGACCAAATTGTCATGGGACAAACCAAGGCTCAAAAATAAATTAGACAACTATAAGTCATCATGGAGTCTTTGGAAACAATTGCAAGGGAAGGAGACTGGATTAGGGTGGGATGCCGAAAAAGGATCACTAAGTGCTAGTGATAAATGGTGGGACTCAAAGATTAAGTGCTACAGGGGCAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_269860.p1 GENE.R_Transcript_269860~~R_Transcript_269860.p1 ORF type:5prime_partial len:120 (+),score=21.16,Myb_DNA-bind_3|PF12776.3|4.8e-19 R_Transcript_269860:2-361(+)
EGGGEIGRQDNGRVKWSKELLHILCDLCIQYTEKSKEKRGEITSQRIEWKKVVPEFQKKTKLSWDKPRLKNKLDNYKSSWSLWKQLQGKETGLGWDAEKGSLSASDKWWDSKIKCYRGS*

Click here to download the sequence:
Link to NCBI Protein BLAST