Transcript Information: R_Transcript_26989.p1


Annotated TAIR IDAT5G53460.1
Annotated Gene NameNADH-dependent glutamate synthase 1
Annotated Gene Symbol(s)GLT1
Annotation TypeOrtholog
Chromosome Positionchr5:21700518-21709629 | Forward length=2208
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1104.84553417253
Replicate 264.909698447862
Replicate 383.358227169415
Condition 2: 8 Hour
Replicate 163.570557891428
Replicate 251.926824753325
Replicate 381.457295429389
Condition 3: 24 Hour
Replicate 1107.71236189618
Replicate 2107.1255431828
Replicate 3122.46856304304


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_26989.p1 GENE.R_Transcript_26989~~R_Transcript_26989.p1 ORF type:complete len:2219 (+),score=563.89,GATase_2|PF00310.17|2.7e-184,Glu_synthase|PF01645.13|2.9e-161,Glu_syn_central|PF04898.10|1.6e-114,Glu_syn_central|PF04898.10|1.1e+03,GXGXG|PF01493.15|9.4e-81,Pyr_redox_2|PF07992.10|4.3e-27,Fer4_20|PF14691.2|5.3e-21,NAD_binding_8|PF13450.2|2e-08,Pyr_redox|PF00070.23|0.00012,Pyr_redox|PF00070.23|14,Pyr_redox|PF00070.23|1.4e+04,Pyr_redox_3|PF13738.2|0.0064,Pyr_redox_3|PF13738.2|0.58,Amino_oxidase|PF01593.20|1.2e-05,DAO|PF01266.20|0.0039,DAO|PF01266.20|6.7 R_Transcript_26989:296-6952(+)
ATGTCGTCCACGGCGGGAGGAATCGGCTCCGTGCTGCAGCTCCGGAGCAAGACCGGTTCACCCAGTCTCAACCGGACGGTAAACCCGGTCGGCGTGGCGGTACCTTTGCCGCTTTGTCGGTTCGGGAAGAGATCGTCAAGGAGCTATTCCGTCAGGAGATGGTCCCACCCAAGTTCCACCGAGAACAAGACTAGTTTGTTCGGAAAACGGGTGGTCGGATCCGAGAAGAGGCTCCATCTGCTGAACCCGGATCCGAAACTGAGAACGGTGGTTCGATCCGCATTCTCACTAGTACCGGAAAAGCCCTTCGGGTTGTACGACCCGGCGAATGATAAGGACTCTTGTGGTGTTGGGTTCGTCGCTGAACTCTCCGGTCAAAGCAGCCGTCAAACGGTGAATGATGCGGTGGAGATGTTGGTGAGGATGTCGCACAGAGGGGCGTGTGGTTGTGAGACAAATACTGGTGATGGTGCTGGTATTCTTGTTGGTCTTCCTCATGATTTCTTCTCTGAGGTGGCAAAGGATCTAGGGTTTGTGTTACCAGAGCCAGGAGAATATGCAGTTGGAATGTTTTTCTTGCCTACTTCTGAGGGCAGAAGGGAGGAAAGCAAAAATGTCTTCACTAAGGTTGCAGAGTCACTTGGGCATACTGTCCTTGGATGGCGCTCTGTTCCCACCGACAACTCGGGGTTGGGGAAGTCTGCTCTGCAGACTGAACCTGTGGTTGAACAGGTGTTTCTTACACCATCACCTCGCTCAAAAGCCGACTTTGAGCAACAGATGTACATATTAAGAAGGGTGTCGATGGTAGCCATCAGAGCTGCTTTGAACCTTCAACATGGTGCTGTTAAGGACTTCTATATATGTTCCCTGTCCACAAGGACTGTTGTCTACAAGGGTCAGTTGAAGCCTTCTCAACTGAAAGAGTACTACTATTGGGACCTTGGGAATGAAAGGTTTACGAGCTACATGGCCCTGGTACACTCTCGATTCTCCACAAACACATTTCCCAGCTGGGATCGTGCTCAGCCGATGCGTGTTTTGGGCCATAATGGAGAGATCAACACCCTTCGTGGCAATGTAAATTGGATGCGTGCCCGTGAAGGTCTACTTAAGTGCAGGGAACTTGGATTGTCAAAGAATGAAATGAAGAAGCTCTTGCCTATAGTGGACGCTAGCTCTTCTGATTCAGGAGCGTTTGATGGTGTTCTTGAGCTCTTGATTCGAGCTGGTAGAAGTCTCCCCGAAGCAGTCATGATGATGATCCCTGAAGCATGGCAAAATGATAAGAATATGGATCCTCAGCGAAGGTCCTTCTATGAGTATTTCTCAGCCCTAATGGAACCTTGGGATGGCCCTGCTCTTATAACATTCACTGATGGTCGTTACCTTGGAGCCACATTGGATAGGAATGGTCTGCGCCCAGGACGTTTCTACATAACACACAGTGGAAGAGTAATTATGGCGAGTGAGGTTGGTGTCGTAGATATCCCACCAGAAGATGTATCCAAGAAGGGGCGTCTCAATCCTGGAATGATGCTTTTGGTGGATTTTGACAAACACATTGTTGTAGATGACGAGGCCCTGAAGAAGCAGTATTCACTTGCCATGCCTTATGGTGATTGGCTAAAAAGGCAGAAGTTAGTATTGAAGGACATAGTCAATTCTGTTTCTGAAGCAGAGAGGATTGCTCCCCCAATATCCGGTTCAGCGCCTGTTTCTAATCAAGATGAAGACATGGAGAACATGGGCATTCATGGTTTACTAGCACCATTGAAGGCCTTTGGGTACACGACTGAAGCCTTGGAAATGCTTTTGCTCCCCATGGCCAAAGATGGTACAGAGTCCCTTGGTTCCATGGGAAATGATACCCCCTTGGCTGTGATGTCAAACAGAGAAAAACTCACTTTTGAGTACTTCAAGCAGATGTTTGCTCAGGTTACAAACCCTCCTATTGATCCGATCAGGGAGAAGATTGTGACCTCTACGGAGTGTATGATTGGTCCAGAAGGTGATCTCACAGAAACAACCGAGGAGCAATGTCATCGTCTCTCATTAAAGGGTCCTCTTTTATCTATTGAGGAAATGGAAGCAATCAAGAAGATGGACTATAGGGGCTGGCGTAGCAAAGTTATTGATATAACTTATCCCAAGACCCTTGGTAGGAAGGGCTTGGAGGAGACATTAGACAGGATTTGTGCTGAAGCGAGGGAAGCAATAAAGGAGGGTTTCACCATTCTGGTGCTTTCTGACAGAGCTTTCTCGCCAAGCCGTGTTGCTGTTAGCTCTCTGTTGGCTGTCGGTGCTGTTCATCAGCATCTAGTTAAGACACTCGAGCGTACTCGTGTTGGGCTTATAGTTGAATGTGCTGAACCACGTGAAGTGCACCACTTCTGTACTCTTGTTGGCTTTGGTGTTGATGCTATATGTCCTTATTTAGCCATTGAAGCTATTTGGAGATTGCAAGTTGATGGGAAGGTCCCACCCAAATCAAATGGGGAGTTTCACTCGAAAGAAGAGCTGATCAAAAAGTATTTCAAAGCAAGCAACTATGGAATGATGAAGGTTCTTGCTAAGATGGGAATTTCAACCTTGGCGTCTTACAAGGGTGCTCAGATCTTTGAAGCTGTGGGTCTTTCTTCGGATGTCATTGGGAGGTGTTTCACTGGAACTGCAAGCAGAGTCGAAGGTGCAACTTTTGAAGCACTTGCTTTTGATGCACTTAGACTCCATGAGATGGCATTTCCCAAGCGGGCCCTTCCAGAAGGAAGTGCTGAATCAATGGCACTGCCTAATCCAGGGGACTATCATTGGAGAAAAGGTGGTGAGCTTCACCTCAATGACCCCCTTGCTATAGCCAAGTTGCAAGAGGCTGCTAAATCTAACAGTGTCGCAGCATACAAAGAGTATTCAAATCGTATAAATGAATTGAATAAATCATGCAACTTGAGAGGGCTTTTGAAGTTCAAGGAGGCAAGGGAGAAAGTTCCCTTGGATGAGGTAGAACCTGCAAGTGAGATTGTGAAACGGTTCTGCACTGGAGCTATGAGTTATGGATCAATCTCCCTTGAGGCGCACACAACTTTGGCTGTGGCTATGAACAAGCTTGGCGGCAAGTCTAACACTGGTGAGGGAGGTGAGAATCCTTCTCGTCTAGAACCTCTCCCAGATGGTTCCATGAATCCCAAGAGGAGTGCAATTAAGCAGGTGGCCAGTGGAAGATTTGGTGTTTCCAGTTATTACTTGACCAACGCTGATGAACTGCAGATAAAAATGGCTCAGGGTGCAAAGCCTGGTGAAGGAGGTGAACTTCCTGGACATAAGGTCATTGGAGACATTGCTGTTACTAGAAACTCGACTGCTGGTGTTGGTCTTATAAGTCCTCCTCCCCATCATGACATCTACTCGATTGAGGACCTTGCCCAACTGATTCATGATTTGAAGAATGCCAATCCATCAGCCCGAGTCAGTGTTAAACTTGTTTCTGAAGCTGGAGTTGGAGTGATTGCTTCTGGGGTTGTCAAGGGCCATGCAGACCATGTTTTGATCTCTGGACATGATGGAGGAACTGGGGCTTCTCGATGGACTGGTATAAAGAATGCTGGGCTTCCTTGGGAGCTTGGACTTGCTGAGACCCATCAAACTCTAGTTGCAAATGACCTTCGTGGCCGTACAACCCTTCAAACTGATGGGCAACTCAAAACAGGAAGAGACGTGGCAATTGCTGCTCTTCTTGGAGCTGAAGAGTTTGGTTTCAGCACAGCACCCCTCATTACACTTGGATGTATTATGATGAGAAAGTGCCATAAGAATACTTGTCCAGTGGGCATTGCCACACAGGACCCAGTTCTTCGCGCTAAGTTTGCTGGTGAACCGGAGCATGTAATCAATTTCTTCTTTATGCTAGCAGAGGAGGTGAGGGAAATTATGTCTCAGCTTGGATTCAGGAAGCTTGATGACATGGTTGGTCGTTCTGATATGCTTGAGCTCGACGAAGACGTCACAAAGAGCAATGAGAAGCTGAAGAATATTGACCTTTCCCTCTTGCTTAGACCAGCTGCCAGTATCCGTCCAGGTGCTGCCCAGCGCTGTGTCCAAAAGCAGGATCATGGTTTGGACATGGCTTTAGATCGAGAACTGATTTCCCTTTCTAAAGCTGCATTGGAGAAGGCACTTCCTGTTTATATTGAAACACCCATACGCAATGTGAACCGCGCAGTGGGGACTATGCTCAGCCATGAGGTGACAAAGCGGTACCACTTGGATGGGCTACCGACTGATACCATCCACGTTAAATTTAATGGAAGTGCAGGGCAGAGTCTTGGAGCCTTTCTGTGCCCCGGTATCACCTTGGAGCTAGAAGGTGACAGCAATGACTATGTTGGGAAAGGACTATCAGGTGGAAAGATTGTTGTGTATCCTCCAAGAAGTAGCGGTTTTGATCCAAAAGATAATATAGTCATTGGTAATGTAGCTCTGTACGGAGCAATAAAAGGAGAAGCTTATTTTAATGGCATGGCTGCAGAAAGATTTTGTGTCCGTAATTCAGGGGCTAAGGCTGTTGTAGAAGGTGTTGGTGATCATGGATGTGAGTACATGACTGGGGGAACTGTAGTGGTGCTTGGAAAAACAGGTAGAAACTTTGCTGCTGGTATGAGTGGGGGTATTGCCCATGTTCTAGATTTAGATGGCAAATTCCATTCCCGTTGCAATCCTGAGCTTGTAGATCTTGACAAAGTTGAGGAAGAGGAAGATATCATGACCCTCAGGATGATGATTCAACAACATCAACGTCATACAAACAGCCAGCTAGCAAAGGAAGTCCTTGATGACTTTGACAATCTTCTACCTAAATTCATCAAGGTCTTCCCAAGAGATTATAAACGTGTCCTTGCAAGCATGAAAGCTGATGGGCCTACAAAGGAGGCTGCAGGAAGTCTGCCCAAAGATGCCAAAGAATCCGAGGAGAAGGATGAGGTTGAGGTTGTCGAGAAGGATGCTTTTGAAGAACTAAAGAAGATGGCAGCTGCAACATTGAAAGGGCAAGCTGACGAGGAAAAGCAGGAGGTTATTCCAGAGACGCAACGTCCTTCTCGAGTCCCTGATGCTCAAAAACATCGTGGTTTTGTTGCTTATGAGCGTGAAGGGATTCAATATCGGGACCCTAATGAGAGGATGAAGGACTGGAAAGAAGTGATGGATGAGTCAAGACCCGCTCCCTTGTTGAAGACACAATCTGCCCGCTGCATGGATTGTGGCACTCCATTTTGTCATCAGGAAAATTCGGGCTGTCCACTTGGAAACAAAATACCTGAGTTCAATGAATTAGTTTACCAAAACAGATGGCGTGAAGCTCTTGATCGCCTTCTAGAGACAAATAACTTCCCGGAGTTTACTGGTCGAGTTTGTCCTGCCCCTTGTGAGGGTTCCTGTGTTCTTGGCATTATTGAGAATCCTGTGTCTATCAAAACTATTGAGTGTGCCATCATAGACAAAGCTTTTGAGGAAGGATGGATGGTGCCACGGCTACCATTGAAAAGAACTGGGAAAAGAGTTGCTATAGTTGGAAGTGGTCCAGCTGGCTTGGCTGCAGCTGATCAGCTCAACAAAATGGGACACACTGTTACTGTTTATGAGCGTGCTGATAGAATTGGTGGGCTCATGATGTACGGAGTGCCCAACATGAAGGCTGATAAAGTTGATATTGTCCAAAGACGTGTCAACCTCATGGCTGAGGAAGGCGTCAATTTTGTGGTCAATGCAAATGTTGGCAAGGATCTACTTTACTCTGTTGATCGGCTGAAGGAAGAGAATGATGCCATTGTTTTGGCAGTTGGTGCCACAAAGCCACGGGACCTTCCTATTGAAGGACGGGACTTGTCAGGAGTCCATTTTGCCATGGAATTTTTACATGCCAATACTAAGAGCTTACTAGATAGTAATCTACAAGATGGCAACTACATCTCTGCTAAAGGGAAGAAGGTTGTGGTCATAGGTGGAGGTGATACAGGTACAGATTGCATTGGTACATCTATCCGACATGGCTGTACTAATGTTGTCAACTTGGAGCTTCTTCCTGAGCCACCAAAGTCAAGAGCTCCAGGCAATCCTTGGCCACAGTGGCCTCGTGTCTTCCGTGTTGATTATGGGCACCAGGAGGCAACCACCAAGTTTGGCAAAGACCCAAGGACTTATGAGGTCCTTACAAAACGTTTCGTGGGAGACGAAAATGGGAATGTGAAAGGCATTGAAGTGGTCCGTGTCAAGTGGGAGAAAGATGCTACTGGCAAGTTCCAATTCAAGGAAATTGAAGGCTCACAGGAGTTTATAGAGGCAGATTTAGTTCTTTTGGCTATGGGTTTCCTTGGCCCTGAATCGAACATTGCTGAGAAGCTGGATATGGAGCGAGACAACCGATCCAACTTCAAGGCTGACTATGGACGATTTTCAACCAATGTAGAAGGTGTGTTTGCTGCTGGTGACTGCAGGCGTGGTCAGTCTTTGGTGGTATGGGCCATCTCAGAGGGCCGGCAAGCTGCTTCCCAGGTTGATAGGTACCTTATGGGAGAAGAAAAAGAGGTTTCCGTCATCTCTCCAGCGGAAGAAGTCCTCGACAAGAGGCAGCAGGGCAGCAACAAAAGCACTGTCATGAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_26989.p1 GENE.R_Transcript_26989~~R_Transcript_26989.p1 ORF type:complete len:2219 (+),score=563.89,GATase_2|PF00310.17|2.7e-184,Glu_synthase|PF01645.13|2.9e-161,Glu_syn_central|PF04898.10|1.6e-114,Glu_syn_central|PF04898.10|1.1e+03,GXGXG|PF01493.15|9.4e-81,Pyr_redox_2|PF07992.10|4.3e-27,Fer4_20|PF14691.2|5.3e-21,NAD_binding_8|PF13450.2|2e-08,Pyr_redox|PF00070.23|0.00012,Pyr_redox|PF00070.23|14,Pyr_redox|PF00070.23|1.4e+04,Pyr_redox_3|PF13738.2|0.0064,Pyr_redox_3|PF13738.2|0.58,Amino_oxidase|PF01593.20|1.2e-05,DAO|PF01266.20|0.0039,DAO|PF01266.20|6.7 R_Transcript_26989:296-6952(+)
MSSTAGGIGSVLQLRSKTGSPSLNRTVNPVGVAVPLPLCRFGKRSSRSYSVRRWSHPSSTENKTSLFGKRVVGSEKRLHLLNPDPKLRTVVRSAFSLVPEKPFGLYDPANDKDSCGVGFVAELSGQSSRQTVNDAVEMLVRMSHRGACGCETNTGDGAGILVGLPHDFFSEVAKDLGFVLPEPGEYAVGMFFLPTSEGRREESKNVFTKVAESLGHTVLGWRSVPTDNSGLGKSALQTEPVVEQVFLTPSPRSKADFEQQMYILRRVSMVAIRAALNLQHGAVKDFYICSLSTRTVVYKGQLKPSQLKEYYYWDLGNERFTSYMALVHSRFSTNTFPSWDRAQPMRVLGHNGEINTLRGNVNWMRAREGLLKCRELGLSKNEMKKLLPIVDASSSDSGAFDGVLELLIRAGRSLPEAVMMMIPEAWQNDKNMDPQRRSFYEYFSALMEPWDGPALITFTDGRYLGATLDRNGLRPGRFYITHSGRVIMASEVGVVDIPPEDVSKKGRLNPGMMLLVDFDKHIVVDDEALKKQYSLAMPYGDWLKRQKLVLKDIVNSVSEAERIAPPISGSAPVSNQDEDMENMGIHGLLAPLKAFGYTTEALEMLLLPMAKDGTESLGSMGNDTPLAVMSNREKLTFEYFKQMFAQVTNPPIDPIREKIVTSTECMIGPEGDLTETTEEQCHRLSLKGPLLSIEEMEAIKKMDYRGWRSKVIDITYPKTLGRKGLEETLDRICAEAREAIKEGFTILVLSDRAFSPSRVAVSSLLAVGAVHQHLVKTLERTRVGLIVECAEPREVHHFCTLVGFGVDAICPYLAIEAIWRLQVDGKVPPKSNGEFHSKEELIKKYFKASNYGMMKVLAKMGISTLASYKGAQIFEAVGLSSDVIGRCFTGTASRVEGATFEALAFDALRLHEMAFPKRALPEGSAESMALPNPGDYHWRKGGELHLNDPLAIAKLQEAAKSNSVAAYKEYSNRINELNKSCNLRGLLKFKEAREKVPLDEVEPASEIVKRFCTGAMSYGSISLEAHTTLAVAMNKLGGKSNTGEGGENPSRLEPLPDGSMNPKRSAIKQVASGRFGVSSYYLTNADELQIKMAQGAKPGEGGELPGHKVIGDIAVTRNSTAGVGLISPPPHHDIYSIEDLAQLIHDLKNANPSARVSVKLVSEAGVGVIASGVVKGHADHVLISGHDGGTGASRWTGIKNAGLPWELGLAETHQTLVANDLRGRTTLQTDGQLKTGRDVAIAALLGAEEFGFSTAPLITLGCIMMRKCHKNTCPVGIATQDPVLRAKFAGEPEHVINFFFMLAEEVREIMSQLGFRKLDDMVGRSDMLELDEDVTKSNEKLKNIDLSLLLRPAASIRPGAAQRCVQKQDHGLDMALDRELISLSKAALEKALPVYIETPIRNVNRAVGTMLSHEVTKRYHLDGLPTDTIHVKFNGSAGQSLGAFLCPGITLELEGDSNDYVGKGLSGGKIVVYPPRSSGFDPKDNIVIGNVALYGAIKGEAYFNGMAAERFCVRNSGAKAVVEGVGDHGCEYMTGGTVVVLGKTGRNFAAGMSGGIAHVLDLDGKFHSRCNPELVDLDKVEEEEDIMTLRMMIQQHQRHTNSQLAKEVLDDFDNLLPKFIKVFPRDYKRVLASMKADGPTKEAAGSLPKDAKESEEKDEVEVVEKDAFEELKKMAAATLKGQADEEKQEVIPETQRPSRVPDAQKHRGFVAYEREGIQYRDPNERMKDWKEVMDESRPAPLLKTQSARCMDCGTPFCHQENSGCPLGNKIPEFNELVYQNRWREALDRLLETNNFPEFTGRVCPAPCEGSCVLGIIENPVSIKTIECAIIDKAFEEGWMVPRLPLKRTGKRVAIVGSGPAGLAAADQLNKMGHTVTVYERADRIGGLMMYGVPNMKADKVDIVQRRVNLMAEEGVNFVVNANVGKDLLYSVDRLKEENDAIVLAVGATKPRDLPIEGRDLSGVHFAMEFLHANTKSLLDSNLQDGNYISAKGKKVVVIGGGDTGTDCIGTSIRHGCTNVVNLELLPEPPKSRAPGNPWPQWPRVFRVDYGHQEATTKFGKDPRTYEVLTKRFVGDENGNVKGIEVVRVKWEKDATGKFQFKEIEGSQEFIEADLVLLAMGFLGPESNIAEKLDMERDNRSNFKADYGRFSTNVEGVFAAGDCRRGQSLVVWAISEGRQAASQVDRYLMGEEKEVSVISPAEEVLDKRQQGSNKSTVMK*

Click here to download the sequence:
Link to NCBI Protein BLAST