Transcript Information: R_Transcript_270216.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value3E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.10371000542454
Replicate 20.11929716145624
Replicate 30.65075959079978
Condition 2: 8 Hour
Replicate 10.27824846530961
Replicate 20
Replicate 30.2062683025044
Condition 3: 24 Hour
Replicate 10
Replicate 20.12531397096919
Replicate 30.12436195844828


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_270216.p2 GENE.R_Transcript_270216~~R_Transcript_270216.p2 ORF type:complete len:176 (+),score=21.98,RVT_1|PF00078.23|4.1e-30 R_Transcript_270216:1053-1580(+)
ATGATCCTGCAAAATATTACTAAACACTACGAGCGGAAAAATACATCCCCAAGATGTATTATGAAAATTGACTTGAAGAAGGCATATGACTCTGTAAGCTGGCATTTTCTGGAAGAGATGCTGAGGGCATTAAATTTTCCTGAAGTATTCATCTCCTGGTTACGTACTTGCACTTGTAGTGCCTACTATACAATTGCACTGAATGGAGGTTATCATGGTTTTTTCAAGGGTGCACAAGGATTAAGGCAAGGTGATCCTCTATCCCCTCTTCTTTTTGTGATTTGTATGGAATATTTGTCTCGAATTATGCAAATTTTAGAGGAACTTGGGGATTTTTCTTATCACCCTCTTTGTAATAAGATGTCTATTAACCATATTTTCTTTGTTGATGATTTGATCCTCTTTTGTAATGGGGATTACATGTCTGTGAACATTATGCTGAGGGGTTTTAAAAATTTCTCGGAGGCTTCTAGTTTGGAGATGAACAAAAATAAGCCAGCTATTTATATTGGGGGTATGGATGAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_270216.p2 GENE.R_Transcript_270216~~R_Transcript_270216.p2 ORF type:complete len:176 (+),score=21.98,RVT_1|PF00078.23|4.1e-30 R_Transcript_270216:1053-1580(+)
MILQNITKHYERKNTSPRCIMKIDLKKAYDSVSWHFLEEMLRALNFPEVFISWLRTCTCSAYYTIALNGGYHGFFKGAQGLRQGDPLSPLLFVICMEYLSRIMQILEELGDFSYHPLCNKMSINHIFFVDDLILFCNGDYMSVNIMLRGFKNFSEASSLEMNKNKPAIYIGGMDE*

Click here to download the sequence:
Link to NCBI Protein BLAST