Transcript Information: R_Transcript_270217.p3


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value3E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.51057233439773
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.16054410648744
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_270217.p3 GENE.R_Transcript_270217~~R_Transcript_270217.p3 ORF type:complete len:143 (+),score=12.43,RVT_1|PF00078.23|2.6e-11 R_Transcript_270217:2120-2548(+)
ATGGTCTTTATTATGGTTTTTTTTAAGGGAGCAAAGGGCTTAAGACAAGGCGATCCACTCTTTCCTCTTCTTTTTGTGCTATGTATGGAATACTTATCTAGAGTCATGCAAGTAGTGGGGGAGTTAGGGGATTTCTCCTATCATCCTCTGTATAAAAAGATGGCCATTAATCACATCTGTTTTGCTGATAATTTGATCTTGTTTTGTAATGGGGATTACAAGTCTGTGAACATTATGCTGAGGGGTTTTAAAAACTTCTTTGAGACATCTGGATTAGAGATGAATAAAAAACAAGTCAGCTATGTATCTAAGTGGTATGGAGGAGCAGATGAAGGTGGGATTGAGCTAGCTGATAGGACTGCATATCGCTTCCCTCCCCTTTACTTACTTGGGTGTTCCAATTACATCCAAAAGATTAACTGTAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_270217.p3 GENE.R_Transcript_270217~~R_Transcript_270217.p3 ORF type:complete len:143 (+),score=12.43,RVT_1|PF00078.23|2.6e-11 R_Transcript_270217:2120-2548(+)
MVFIMVFFKGAKGLRQGDPLFPLLFVLCMEYLSRVMQVVGELGDFSYHPLYKKMAINHICFADNLILFCNGDYKSVNIMLRGFKNFFETSGLEMNKKQVSYVSKWYGGADEGGIELADRTAYRFPPLYLLGCSNYIQKINCS*

Click here to download the sequence:
Link to NCBI Protein BLAST