Transcript Information: R_Transcript_27027.p1


Annotated TAIR IDAT5G58470.1
Annotated Gene NameTBP-associated factor 15B
Annotated Gene Symbol(s)TAF15b
Annotation TypeOrtholog
Chromosome Positionchr5:23638566-23640854 | Reverse length=422
E-Value9.5E-159
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.635838222122
Replicate 222.474913121671
Replicate 331.671522169328
Condition 2: 8 Hour
Replicate 148.109551551277
Replicate 251.860448965003
Replicate 358.374898004531
Condition 3: 24 Hour
Replicate 149.310783129928
Replicate 242.919740892696
Replicate 342.182642131321


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_27027.p1 GENE.R_Transcript_27027~~R_Transcript_27027.p1 ORF type:5prime_partial len:426 (+),score=146.33,RRM_1|PF00076.18|5e-06,RRM_1|PF00076.18|0.25,RRM_6|PF14259.2|4.2e-08,zf-RanBP|PF00641.14|2.5e-06 R_Transcript_27027:3-1280(+)
GGCGAGGGTGGAAACTACGGTGGAGGTAGAGGTGGTGGAGGATACGGCGGTGCCCAAGGTGGCCGAGGAGGTGGTGGAGGATACGGCGGTGGTAGAGGTGGTGGATACGGCGGTAACTCCGATAATCGAGGTGGTGGATATCAAGGAGGAGAACGTGGTGGCCGTGGAGGAAGAGGCGGTGGTGGTGGCGGCAGTCGTGGAGGCAGTGGCAGAGATGGTGACTGGCTGTGCCCTAATCCAAGTTGTGGGAACTTGAACTTTGCAAGAAGAACTGCTTGTAACAAATGTGGTGAACCTTCTCCTTCTGGTGGCGGTGGTGGTCCTGGTAGCGGTGATCGTGGTGGAAGCGGGGGAGGTGGTGGGTACAACAGAGGTGGTGGTGGAGGATATGGTGGTGATAGAGGGGGTAGGGGCAGGGAAAGCAACTATGAAGGTGGAAGGGGGGGATGTAACAGAGGTGGTTCATATGGTGATGGTCAGGCAAGAGAGGATGGTGGTTATGGTCAGGTTCCAGCACCTGCACCTCATGGAGGGGGTGGGGGTTACCCTCCTGCACAGAATCCTTATGCCACAAGCCCTGCGTATGGGAGTGATGCAGCGGTGCCCCCACCTACTAGCTATACTGGTGGTCCTGGATCATATCCACCATCATATGGGGCCCCTGCTGGTGGATATGGTGGTGATAATTCTGGATCTTACCGTGGTGGTGGACGTGGTGGTGCAACTGGTGGCTATGGTGGTGGCCCACGAAACTCGGGTGGTGGAAGCTATGGTGGTGGTGCCCCAGCAGCTGCTGACCCACCAGTGAAGGTCAAGCAGTGTGACGAAAATTGTGGTGATTCCTGTGACAATGCAAGGATTTATATCTCCAACTTGCCACCTGATGTAACAATTGAAGAACTCAGAGAACTTTTTGGAAGCATTGGAACAGTTGCAAGAATCAAGCAAAAGAGAGGCTACAAGGATCAATGGCCATGGAGTATAAAATTATACACCGATGAAAATGGAAAGAACAAGGGTGATGCTGTATTGTCTTATGAGGACCCATCAGCAGCTCATTCTGCTGGAGGCTTTTTTAACAGTCATGATTTGCGAGGATATAAGATCAATGTTGCAATGGCAGAGAAGTCTGCTCCTAGGGCACCTCAGTCTTATGGCCATGGGGGTGGTGGCCGAGGCGGTTATGGAGGTGGAGACAGACGTAGAGATTACAGAGACAGTGGAGGAGCTGGTCCGGATAGACATTTTCACGGTGGAAATCGTTCTCGGCCGTATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_27027.p1 GENE.R_Transcript_27027~~R_Transcript_27027.p1 ORF type:5prime_partial len:426 (+),score=146.33,RRM_1|PF00076.18|5e-06,RRM_1|PF00076.18|0.25,RRM_6|PF14259.2|4.2e-08,zf-RanBP|PF00641.14|2.5e-06 R_Transcript_27027:3-1280(+)
GEGGNYGGGRGGGGYGGAQGGRGGGGGYGGGRGGGYGGNSDNRGGGYQGGERGGRGGRGGGGGGSRGGSGRDGDWLCPNPSCGNLNFARRTACNKCGEPSPSGGGGGPGSGDRGGSGGGGGYNRGGGGGYGGDRGGRGRESNYEGGRGGCNRGGSYGDGQAREDGGYGQVPAPAPHGGGGGYPPAQNPYATSPAYGSDAAVPPPTSYTGGPGSYPPSYGAPAGGYGGDNSGSYRGGGRGGATGGYGGGPRNSGGGSYGGGAPAAADPPVKVKQCDENCGDSCDNARIYISNLPPDVTIEELRELFGSIGTVARIKQKRGYKDQWPWSIKLYTDENGKNKGDAVLSYEDPSAAHSAGGFFNSHDLRGYKINVAMAEKSAPRAPQSYGHGGGGRGGYGGGDRRRDYRDSGGAGPDRHFHGGNRSRPY*

Click here to download the sequence:
Link to NCBI Protein BLAST